RNA–Protein interactions for RNA: ENST00000513678.5

MATR3-222, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-222	ENST00000513678	HES1	Q14469	280 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	C9orf152	Q5JTZ5	239 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	RBM48	Q5RL73	367 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	PRSS48	Q7RTY5	328 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	TGIF2LX	Q8IUE1	241 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	UBALD1	Q8TB05	177 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	MRPL30	Q8TCC3	161 aa	Known RBP	13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	MRAP	Q8TCY5	172 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	EAF1	Q96JC9	268 aa	Predicted RBP	13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	TAF9B	Q9HBM6	251 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	GNG12	Q9UBI6	72 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	LRRC42	Q9Y546	428 aa		13.3	□□□□□ -0.28
MATR3-222	ENST00000513678	IGHV3-43	A0A0B4J1X8	118 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	PSMB11	A5LHX3	300 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	TMEM14DP	A8MWL7	114 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	BPNT1	O95861	308 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	MPIG6B	O95866	241 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	PF4	P02776	101 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	IGHV3-43D	P0DP04	118 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	HTR2C	P28335	458 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	VHL	P40337	213 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	ZNF134	P52741	427 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	HTD2	P86397	168 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	MLLT11	Q13015	90 aa	Predicted RBP	13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	CT45A1	Q5HYN5	189 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	LIPK	Q5VXJ0	399 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	MOB3B	Q86TA1	216 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	OR8H1	Q8NGG4	311 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	OR6M1	Q8NGM8	313 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	OR2T10	Q8NGZ9	312 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	OR1L1	Q8NH94	360 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	CT45A3	Q8NHU0	189 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	CHPT1	Q8WUD6	406 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	FAM46B	Q96A09	425 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	RCC1L	Q96I51	464 aa	Known RBP	13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	TMEM59	Q9BXS4	323 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	KCNIP1	Q9NZI2	227 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	JPT1	Q9UK76	154 aa		13.29	□□□□□ -0.28
MATR3-222	ENST00000513678	DNAH9	Q9NYC9	4486 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	UBE2QL1	A1L167	161 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	SLC31A2	O15432	143 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	LANCL1	O43813	399 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	ARL6IP5	O75915	188 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	CPE	P16870	476 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	REG1B	P48304	166 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	UNC119	Q13432	240 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	ETV3L	Q6ZN32	361 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	TMEM91	Q6ZNR0	172 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	NEDD4L	Q96PU5	975 aa		13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	LIN7C	Q9NUP9	197 aa	Known RBP	13.28	□□□□□ -0.28
MATR3-222	ENST00000513678	NAPSA	O96009	420 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	HNF4G	Q14541	408 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	MORN2	Q502X0	79 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	KHDC1L	Q5JSQ8	128 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	OR10K2	Q6IF99	312 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	ZNF880	Q6PDB4	577 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	OR2W3	Q7Z3T1	314 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	ZNF329	Q86UD4	541 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	FAM89B	Q8N5H3	189 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	COMMD1	Q8N668	190 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	LINC00482	Q8N8I6	264 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	NOL4L	Q96MY1	436 aa	Predicted RBP	13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	SULT4A1	Q9BR01	284 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	OR2S2	Q9NQN1	319 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	PLSCR3	Q9NRY6	295 aa		13.27	□□□□□ -0.29
MATR3-222	ENST00000513678	SLC17A2	O00624	439 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	YPEL1	O60688	119 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	DUS4L	O95620	317 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	MOS	P00540	346 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	SLC6A1	P30531	599 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	RANBP1	P43487	201 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	RPL23A	P62750	156 aa	Known RBP	13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	HMGN3	Q15651	99 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	TBCE	Q15813	527 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	NKAPL	Q5M9Q1	402 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	IZUMO2	Q6UXV1	221 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	SLC35E3	Q7Z769	313 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	PRR18	Q8N4B5	295 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678		Q8N9W7	124 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	OR10V1	Q8NGI7	309 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	TMEM203	Q969S6	136 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	YPEL2	Q96QA6	119 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	GFI1	Q99684	422 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	MGLL	Q99685	303 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	ABCG5	Q9H222	651 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	RIMS4	Q9H426	269 aa	Predicted RBP	13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	COL7A1	Q02388	2944 aa		13.26	□□□□□ -0.29
MATR3-222	ENST00000513678	TRBV6-6	A0A0A6YYG2	114 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	IGHV3-72	A0A0B4J1Y9	119 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	SERPINE3	A8MV23	424 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	RGS11	O94810	467 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	RPS25	P62851	125 aa	Known RBP	13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	MOB1B	Q7L9L4	216 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	C6orf201	Q7Z4U5	140 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	FOXRED2	Q8IWF2	684 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	SVOP	Q8N4V2	548 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	GALM	Q96C23	342 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	CYYR1	Q96J86	154 aa		13.25	□□□□□ -0.29
MATR3-222	ENST00000513678	FAAP24	Q9BTP7	215 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms