RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 OR5P3Q8WZ94 311 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 DIRC2Q96SL1 478 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 TIMM8BQ9Y5J9 83 aaPredicted RBP11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 SCO1O75880 301 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 CLDN14O95500 239 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 SPINK9Q5DT21 86 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 MMP26Q9NRE1 261 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 DUXBA0A1W2PPF3 345 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 CECR9P0C854 216 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 NQO2P16083 231 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 ZNF345Q14585 488 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 AVPI1Q5T686 147 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 IL19Q9UHD0 177 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 FER1L5A0AVI2 2057 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 TECTAO75443 2155 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 RAB19A4D1S5 217 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 H7BYZ3 331 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 OPN1MWP04001 364 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 OPN1MW2P0DN77 364 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 OPN1MW3P0DN78 364 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 GLRXP35754 106 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 H2BFSP57053 126 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 NAAAQ02083 359 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 UBAC2Q8NBM4 344 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 C1orf162Q8NEQ5 155 aaPredicted RBP11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 BTF3L4Q96K17 158 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 PFDN5Q99471 154 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 CCL13Q99616 98 aa11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 FOXD3Q9UJU5 478 aaPredicted RBP11.24□□□□□ -0.61
PCDHA4-202ENST00000512229 CXCL2P19875 107 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 ASPHD2Q6ICH7 369 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 VSTM2AQ8TAG5 236 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 MARS2Q96GW9 593 aaKnown RBP11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 SMIM7Q9BQ49 75 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 TM2D1Q9BX74 207 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 PIPOXQ9P0Z9 390 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 ZDHHC8Q9ULC8 765 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 IGKV3D-15A0A087WSY6 115 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 IGKV1-9A0A0C4DH69 117 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 IGHV1-2P23083 117 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 DYNLT3P51808 116 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 ATP6V1FQ16864 119 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 ASCL5Q7RTU5 278 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 C15orf54Q8N8G6 183 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 C9orf106Q8NAJ2 232 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 POMT1Q9Y6A1 747 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 TRIM77I1YAP6 450 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 OR4A8P0C604 315 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 FAM27E3Q08E93 113 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 ZNF154Q13106 437 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 FHL1Q13642 323 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 DTD1Q8TEA8 209 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 NEIL1Q96FI4 390 aaPredicted RBP11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 SNX22Q96L94 193 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 GPR137Q96N19 417 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 SLC25A10Q9UBX3 287 aaPredicted RBP11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 DENND4CQ5VZ89 1909 aa11.23□□□□□ -0.61
PCDHA4-202ENST00000512229 MED13LQ71F56 2210 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 MED19A0JLT2 244 aaPredicted RBP11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 NAT2P11245 290 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 CEBPDP49716 269 aaPredicted RBP11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 GFRA1P56159 465 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 TMEM88Q6PEY1 159 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 OR52L2PQ8NGH6 319 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 LRFN3Q9BTN0 628 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 TMEM222Q9H0R3 208 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 CLN8Q9UBY8 286 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 KCNMB2Q9Y691 235 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 CCL1P22362 96 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 CEACAM3P40198 252 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 OR11H4Q8NGC9 324 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 HES4Q9HCC6 221 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 FBLN5Q9UBX5 448 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 ODAMA1E959 279 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 SMPD2O60906 423 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 G6PCP35575 357 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 EWSR1Q01844 656 aaKnown RBP eCLIP11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 PSG7Q13046 419 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 FFAR4Q5NUL3 377 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 TGIF2LYQ8IUE0 185 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 TGIF2LXQ8IUE1 241 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 LTBP2Q14767 1821 aa11.22□□□□□ -0.61
PCDHA4-202ENST00000512229 CRYM-AS1A6NIL9 109 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 NCBP2LA6PVI3 153 aaKnown RBP11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 OR2C1O95371 312 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 FAM87AP0C7U9 286 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 MGST1P10620 155 aaKnown RBP11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 ANKRD55Q3KP44 614 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 NSUN5P2Q63ZY6 315 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 HIST2H3AQ71DI3 136 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 HSD17B13Q7Z5P4 300 aaPredicted RBP11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 OR8B3Q8NGG8 313 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 WBP1Q96G27 269 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 OR8B2Q96RD0 313 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 CISD1Q9NZ45 108 aaKnown RBP11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
PCDHA4-202ENST00000512229 OR2A4O95047 310 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms