RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 ALKBH1Q13686 389 aaKnown RBP8.89□□□□□ -0.99
RNF4-216ENST00000511859 IRF3Q14653 427 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 MED22Q15528 200 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 Q6P435 159 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 PRSS48Q7RTY5 328 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 ANKRD13BQ86YJ7 626 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 RDH10Q8IZV5 341 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 TMEM104Q8NE00 496 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 OR2G2Q8NGZ5 317 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 OR52N1Q8NH53 320 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 MYCBPQ99417 103 aaPredicted RBP8.89□□□□□ -0.99
RNF4-216ENST00000511859 MND1Q9BWT6 205 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 YTHDF1Q9BYJ9 559 aaKnown RBP8.89□□□□□ -0.99
RNF4-216ENST00000511859 BARHL1Q9BZE3 327 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 TOLLIPQ9H0E2 274 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 TPSG1Q9NRR2 321 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 FRRS1LQ9P0K9 344 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 ZNF107Q9UII5 783 aaPredicted RBP8.89□□□□□ -0.99
RNF4-216ENST00000511859 STUB1Q9UNE7 303 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 MUC4Q99102 2169 aa8.89□□□□□ -0.99
RNF4-216ENST00000511859 SLC33A1O00400 549 aaPredicted RBP8.88□□□□□ -0.99
RNF4-216ENST00000511859 DEGS1O15121 323 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 TNFAIP8O95379 198 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 HSMCR30P0CW71 290 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 REG1BP48304 166 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 F2RL1P55085 397 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 PDZK1IP1Q13113 114 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 ATXN7L3Q14CW9 347 aaPredicted RBP8.88□□□□□ -0.99
RNF4-216ENST00000511859 ZNF485Q8NCK3 441 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 OR51T1Q8NGJ9 327 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 OR10AC1Q8NH08 325 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 PP6455Q8WZ26 134 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 FLYWCH2Q96CP2 140 aaKnown RBP8.88□□□□□ -0.99
RNF4-216ENST00000511859 PDCD1LG2Q9BQ51 273 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 ALX4Q9H161 411 aaPredicted RBP8.88□□□□□ -0.99
RNF4-216ENST00000511859 PPIL3Q9H2H8 161 aaKnown RBP8.88□□□□□ -0.99
RNF4-216ENST00000511859 BABAM2Q9NXR7 383 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 LSM2Q9Y333 95 aaKnown RBP8.88□□□□□ -0.99
RNF4-216ENST00000511859 WSB1Q9Y6I7 421 aa8.88□□□□□ -0.99
RNF4-216ENST00000511859 MEIKINA0A087WXM9 373 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 LOC107986453A0A1B0GWG9 222 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 OR4C45A6NMZ5 311 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 G3V318 75 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 H0Y980 276 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 KDM4BO94953 1096 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 PRKACBP22694 351 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 GLP1RP43220 463 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 SPHARQ15513 63 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 KCTD21Q4G0X4 260 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 RNLSQ5VYX0 342 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 ZNF773Q6PK81 442 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 SPARTQ8N0X7 666 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 LINC00311Q8N616 119 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 TSPAN14Q8NG11 270 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 OR13A1Q8NGR1 328 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 OR5AK2Q8NH90 309 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 RFESDQ8TAC1 157 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 GATAD1Q8WUU5 269 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 TMED9Q9BVK6 235 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 HIPK2Q9H2X6 1198 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 ACOT13Q9NPJ3 140 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 KIF25Q9UIL4 384 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
RNF4-216ENST00000511859 IGHV4OR15-8A0A075B7B6 117 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 A0A087WW49 117 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 A0A1W2PPE3 182 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 HSPB1P04792 205 aaKnown RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 RPSAP08865 295 aaKnown RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 LGALS1P09382 135 aaKnown RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 CELP19835 753 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 IL3RAP26951 378 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 CDK5R1Q15078 307 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 TBCEQ15813 527 aaPredicted RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 NEDD8Q15843 81 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 LTC4SQ16873 150 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 FDX2Q6P4F2 183 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 RPL22L1Q6P5R6 122 aaKnown RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 GTSCR1Q86UQ5 136 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 SVOPQ8N4V2 548 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 C8orf31Q8N9H6 132 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 MINDY2Q8NBR6 621 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 OR51A4Q8NGJ6 313 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 OR13C5Q8NGS8 318 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 RTN4IP1Q8WWV3 396 aaPredicted RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 ZCCHC4Q9H5U6 513 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 KIAA1456Q9P272 454 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 TRAV41A0A0B4J266 112 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 IGKV1-12A0A0C4DH73 117 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 OGG1O15527 345 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 TXNL1O43396 289 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 IGKV1D-12P01611 117 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 UBCP0CG48 685 aaKnown RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 ATF1P18846 271 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 GZMHP20718 246 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 PSMB9P28065 219 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 CCR9P51686 369 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 PAX5Q02548 391 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 MRPL28Q13084 256 aaKnown RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 LIPKQ5VXJ0 399 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 LINC00322Q6ZN03 302 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms