RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 OR4A16Q8NH70 328 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 MRPL30Q8TCC3 161 aaKnown RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 PNRC2Q9NPJ4 139 aaKnown RBP12.81□□□□□ -0.36
USP38-202ENST00000510377 CLN8Q9UBY8 286 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 ZNF391Q9UJN7 358 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 TRAPPC1Q9Y5R8 145 aa12.81□□□□□ -0.36
USP38-202ENST00000510377 IGKV1-27A0A075B6S5 117 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 A8MXE2 369 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 EGR1P18146 543 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 OR3A1P47881 315 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 PKIAP61925 76 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 PYY3Q5JQD4 70 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 OR2T10Q8NGZ9 312 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 NAT8Q9UHE5 227 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 LRP5LA4QPB2 252 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BKO60814 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BJP06899 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BOP23527 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BBP33778 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BDP58876 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BCP62807 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST2H2BEQ16778 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.8□□□□□ -0.36
USP38-202ENST00000510377 VHLLQ6RSH7 139 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HEPN1Q6WQI6 88 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 SLC35E3Q7Z769 313 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BHQ93079 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 OR4C12Q96R67 309 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BNQ99877 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HIST1H2BMQ99879 126 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 WNT5BQ9H1J7 359 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 OR2D2Q9H210 308 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 LIME1Q9H400 295 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 RBKSQ9H477 322 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 GLRX2Q9NS18 164 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 RYDENQ9NUL5 291 aaKnown RBP12.8□□□□□ -0.36
USP38-202ENST00000510377 DUSP13Q9UII6 198 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 PITPNC1Q9UKF7 332 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 SH2D1BO14796 132 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 FOLR2P14207 255 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 HOXB1P14653 301 aaPredicted RBP12.8□□□□□ -0.36
USP38-202ENST00000510377 G6PCP35575 357 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 FAM3BP58499 235 aaPredicted RBP12.8□□□□□ -0.36
USP38-202ENST00000510377 TUBA4BQ9H853 241 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 OR1A1Q9P1Q5 309 aa12.8□□□□□ -0.36
USP38-202ENST00000510377 CHCHD2Q9Y6H1 151 aaPredicted RBP12.8□□□□□ -0.36
USP38-202ENST00000510377 PI4KAP42356 2102 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 TIMM8AO60220 97 aaPredicted RBP12.79□□□□□ -0.36
USP38-202ENST00000510377 NGFP01138 241 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 OR8G1Q15617 311 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 OR8B8Q15620 311 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 TOMM20LQ6UXN7 152 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 MRGPRGQ86SM5 289 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 H1FOOQ8IZA3 346 aaPredicted RBP12.79□□□□□ -0.36
USP38-202ENST00000510377 SMDT1Q9H4I9 107 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 DOCK11Q5JSL3 2073 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 ZNF729A6NN14 1252 aaPredicted RBP12.79□□□□□ -0.36
USP38-202ENST00000510377 CA11O75493 328 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 CYB5R3P00387 301 aaPredicted RBP12.79□□□□□ -0.36
USP38-202ENST00000510377 CCL1P22362 96 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 ERVFRD-1P60508 538 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 MUCL1Q96DR8 90 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 TECTBQ96PL2 329 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 NCOA6Q14686 2063 aaPredicted RBP12.79□□□□□ -0.36
USP38-202ENST00000510377 F6UZH7 168 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 CDIPTO14735 213 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 FOXO1Q12778 655 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 ICAM4Q14773 271 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 COL19A1Q14993 1142 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 RTP5Q14D33 572 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 IGFBP7Q16270 282 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 FZR1Q9UM11 496 aa12.79□□□□□ -0.36
USP38-202ENST00000510377 FOSL1P15407 271 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 FABP6P51161 128 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 PPP1CBP62140 327 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 RAB31Q13636 194 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 DEFB124Q8NES8 71 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 C18orf12Q96KH6 178 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 NUP210Q8TEM1 1887 aaPredicted RBP12.78□□□□□ -0.36
USP38-202ENST00000510377 B4DEV8 164 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 ELOBQ15370 118 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 C10orf128Q5T292 105 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 TMEM171Q8WVE6 324 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 SF3B5Q9BWJ5 86 aaKnown RBP12.78□□□□□ -0.36
USP38-202ENST00000510377 TCAPO15273 167 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 MGST1P10620 155 aaKnown RBP12.78□□□□□ -0.36
USP38-202ENST00000510377 GCH1P30793 250 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 MS4A10Q96PG2 267 aa12.78□□□□□ -0.36
USP38-202ENST00000510377 PROB1E7EW31 1015 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 RFPL3SP0C7P2 107 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 LYL1P12980 280 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 TBC1D28Q2M2D7 210 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 ACOT6Q3I5F7 207 aaPredicted RBP12.77□□□□□ -0.36
USP38-202ENST00000510377 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 GCNT2Q8N0V5 402 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 TPRX1Q8N7U7 411 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 FGFBP3Q8TAT2 258 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 MRGPRDQ8TDS7 321 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 GALMQ96C23 342 aa12.77□□□□□ -0.36
USP38-202ENST00000510377 PLA2G2EQ9NZK7 142 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms