RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ST6GALNAC6Q969X2 333 aa10.84□□□□□ -0.67
SNF8-206ENST00000509989 CITED1Q99966 193 aa10.84□□□□□ -0.67
SNF8-206ENST00000509989 LIN7BQ9HAP6 207 aa10.84□□□□□ -0.67
SNF8-206ENST00000509989 PLEKHJ1Q9NW61 149 aa10.84□□□□□ -0.67
SNF8-206ENST00000509989 LOC100506127A0A0U1RQW1 187 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 FAM90A9PA6NNJ1 464 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 SNRNP70P08621 437 aaKnown RBP10.83□□□□□ -0.68
SNF8-206ENST00000509989 SNRPBP14678 240 aaKnown RBP10.83□□□□□ -0.68
SNF8-206ENST00000509989 GALP22466 123 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 KIR2DS4P43632 304 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 HNF4GQ14541 408 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 MORN2Q502X0 79 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 C6orf183Q5T699 404 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 ODF3L1Q8IXM7 274 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 TSPAN14Q8NG11 270 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 OR5H6Q8NGV6 325 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 CAPSLQ8WWF8 208 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 MAFIPQ8WZ33 124 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 RPEQ96AT9 228 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 YIPF6Q96EC8 236 aa10.83□□□□□ -0.68
SNF8-206ENST00000509989 A0A075B6Q4 140 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 IGKV1-6A0A0C4DH72 117 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 RAB27BO00194 218 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 PDCD5O14737 125 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 HSD17B6O14756 317 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 SPINT2O43291 252 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 CA11O75493 328 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 SCTP09683 121 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 SMIM18P0DKX4 95 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 LSM3P62310 102 aaKnown RBP10.82□□□□□ -0.68
SNF8-206ENST00000509989 MADCAM1Q13477 382 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 C10orf99Q6UWK7 81 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 SLC25A48Q6ZT89 311 aaKnown RBP10.82□□□□□ -0.68
SNF8-206ENST00000509989 Q6ZTK2 550 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 LYG1Q8N1E2 194 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 LINC00311Q8N616 119 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 KLHDC1Q8N7A1 406 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 OR10X1Q8NGY0 326 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 OCSTAMPQ9BR26 566 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 SLC25A33Q9BSK2 321 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 URM1Q9BTM9 101 aaKnown RBP10.82□□□□□ -0.68
SNF8-206ENST00000509989 CHMP1AQ9HD42 196 aaPredicted RBP10.82□□□□□ -0.68
SNF8-206ENST00000509989 OR2S2Q9NQN1 319 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 OR1A1Q9P1Q5 309 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 GNG12Q9UBI6 72 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 DAPK2Q9UIK4 370 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 RAB22AQ9UL26 194 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 SSR3Q9UNL2 185 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 MGAM2Q2M2H8 2515 aa10.82□□□□□ -0.68
SNF8-206ENST00000509989 PLXNB1O43157 2135 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 IGKV1D-8A0A087WSZ0 117 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 IGHV1-3A0A0C4DH29 117 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 A0A1B0GUS0 222 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 TRIM64CA6NLI5 447 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 CD3GP09693 182 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 GNB3P16520 340 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 CEACAM3P40198 252 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 OR3A3P47888 321 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 SLC16A12Q6ZSM3 486 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 MOB3BQ86TA1 216 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 Q8N2B8 174 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 OR4C13Q8NGP0 309 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 RTN4IP1Q8WWV3 396 aaPredicted RBP10.81□□□□□ -0.68
SNF8-206ENST00000509989 NPFFR1Q9GZQ6 430 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 ZNF696Q9H7X3 374 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 Q9N2K0 584 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 ZNF230Q9UIE0 474 aaPredicted RBP10.81□□□□□ -0.68
SNF8-206ENST00000509989 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
SNF8-206ENST00000509989 NOTOA8MTQ0 251 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 MFNGO00587 321 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 IGKV1D-33P01593 117 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 IGKV1-33P01594 117 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 VSIG10L2P0DP72 767 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 ZNF816Q0VGE8 651 aaPredicted RBP10.8□□□□□ -0.68
SNF8-206ENST00000509989 HERPUD1Q15011 391 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 ABCA11PQ4W5N1 156 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 SFXN4Q6P4A7 337 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 LIAT1Q6ZQX7 453 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 IZUMO1Q8IYV9 350 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 OR10R2Q8NGX6 335 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 LGALS14Q8TCE9 139 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 WIPF2Q8TF74 440 aaPredicted RBP10.8□□□□□ -0.68
SNF8-206ENST00000509989 IL1F10Q8WWZ1 152 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 RITA1Q96K30 269 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 RBM14Q96PK6 669 aaKnown RBP10.8□□□□□ -0.68
SNF8-206ENST00000509989 RANBP3Q9H6Z4 567 aaPredicted RBP10.8□□□□□ -0.68
SNF8-206ENST00000509989 KCNIP1Q9NZI2 227 aa10.8□□□□□ -0.68
SNF8-206ENST00000509989 AMMECR1Q9Y4X0 333 aaPredicted RBP10.8□□□□□ -0.68
SNF8-206ENST00000509989 A0A087WXM4 84 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 TRBV6-6A0A0A6YYG2 114 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 LINC01548A6NM66 108 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 OOSP1A8MZH6 123 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 ST8SIA5O15466 376 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 TNFAIP8O95379 198 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 TSPAN15O95858 294 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 LPLP06858 475 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 BRS3P32247 399 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 PSMD7P51665 324 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 LINC00205P59089 165 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 HLA-DRB3P79483 266 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms