RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 TGIF2LYQ8IUE0 185 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 C1orf87Q8N0U7 546 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 SUMF1Q8NBK3 374 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 DDA1Q9BW61 102 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 WDR61Q9GZS3 305 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 RPRMQ9NS64 109 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 GON4LQ3T8J9 2241 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM250H0YL14 139 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 SOX15O60248 233 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 IFNA1P01562 189 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 HIST1H1BP16401 226 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 RUNX1Q01196 453 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF146Q15072 292 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 VWC2Q2TAL6 325 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 Q6ZRM9 215 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 OR2M7Q8NG81 312 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 RNASEH2CQ8TDP1 164 aaKnown RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 HIST1H2AAQ96QV6 131 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 RNF212BA8MTL3 300 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 SYNGR1O43759 233 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 NEURL1O76050 574 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 SERPINE2P07093 398 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 MDKP21741 143 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 IGFBP4P22692 258 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 OMGP23515 440 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 GDF1P27539 372 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 AARDQ4LEZ3 155 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 WDR25Q64LD2 544 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 CYP2G1PQ6ZSU1 146 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 SSX3Q99909 188 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF552Q9H707 407 aaPredicted RBP7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 B4GALT7Q9UBV7 327 aa7.83□□□□□ -1.16
PDGFRA-208ENST00000509490 C5orf49A4QMS7 147 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF503-AS2A6NEH8 195 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ANKRD30BLA7E2S9 258 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 LY86O95711 162 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 PSG2P11465 335 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ITGA3P26006 1051 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 S100A2P29034 98 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 PRSS12P56730 875 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 PAX5Q02548 391 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 DCAF12Q5T6F0 453 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF787Q6DD87 383 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 C6orf15Q6UXA7 325 aaPredicted RBP7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 THNSL2Q86YJ6 484 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 SCGB1C1Q8TD33 95 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 FAM210BQ96KR6 192 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 HSPB7Q9UBY9 170 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF727A8MUV8 499 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 IFNA10P01566 189 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF883P0CG24 379 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 PI4KAP42356 2102 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ARL16Q0P5N6 197 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 NCMAPQ5T1S8 102 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 TCEAL6Q6IPX3 200 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 SLC23A3Q6PIS1 610 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 OR5R1Q8NH85 324 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 ABHD5Q8WTS1 349 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 CT55Q8WUE5 264 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 DIRC2Q96SL1 478 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 SRD5A3Q9H8P0 318 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM9BQ9NQ34 198 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 IL36RNQ9UBH0 155 aa7.82□□□□□ -1.16
PDGFRA-208ENST00000509490 TGIF2-C20orf24A0A0A6YYL0 155 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF891A8MT65 544 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 SYNGR4O95473 234 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 MBP02144 154 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 WNT5AP41221 380 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 PDLIM4P50479 330 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 RPS18P62269 152 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 OR2B11Q5JQS5 317 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 HLA-CQ95604 372 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 SMOC1Q9H4F8 434 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 PRDM13Q9H4Q3 707 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 HES4Q9HCC6 221 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 PSENENQ9NZ42 101 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 NAT8Q9UHE5 227 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 ERRFI1Q9UJM3 462 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 CABIN1Q9Y6J0 2220 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 MED19A0JLT2 244 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 YIF1AO95070 293 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 PFN1P07737 140 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 PLP2Q04941 152 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 GABRA6Q16445 453 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF674Q2M3X9 581 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 ZNF343Q6P1L6 599 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 NUFIP2Q7Z417 695 aaKnown RBP7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 TMEM217Q8N7C4 229 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 BCL2L2Q92843 193 aaPredicted RBP7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 APH1AQ96BI3 265 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 CACNG5Q9UF02 275 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 PITPNC1Q9UKF7 332 aa7.81□□□□□ -1.16
PDGFRA-208ENST00000509490 PMS2P5A8MQ11 134 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 SLC33A1O00400 549 aaPredicted RBP7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 PPP1R2P9O14990 202 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 KBTBD11O94819 623 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 HLA-HP01893 362 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 TYMSP04818 313 aa7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 BTF3P20290 206 aaKnown RBP7.8□□□□□ -1.16
PDGFRA-208ENST00000509490 WDR31Q8NA23 367 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms