RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CA11O75493 328 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 VDAC1P21796 283 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 SOX6P35712 828 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
TPM3-219ENST00000509409 DGCR2P98153 550 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 DOC2BQ14184 412 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 PACRGLQ8N7B6 248 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 ZNF485Q8NCK3 441 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 TFAP2CQ92754 450 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 RBMXL1Q96E39 390 aaKnown RBP12.09□□□□□ -0.47
TPM3-219ENST00000509409 DERL3Q96Q80 235 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 TAF9BQ9HBM6 251 aa12.09□□□□□ -0.47
TPM3-219ENST00000509409 FAM90A10PA6NDY2 464 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 FAM90A7PA6NKC0 464 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 FAM90A23PA8MXZ1 464 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 GLAP06280 429 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 ELANEP08246 267 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 GP2P55259 537 aaKnown RBP12.08□□□□□ -0.48
TPM3-219ENST00000509409 FOXE3Q13461 319 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 DCTN2Q13561 401 aaKnown RBP12.08□□□□□ -0.48
TPM3-219ENST00000509409 KIR2DS1Q14954 304 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 MORN2Q502X0 79 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 C8orf59Q8N0T1 100 aaPredicted RBP12.08□□□□□ -0.48
TPM3-219ENST00000509409 ZNF439Q8NDP4 499 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 BPIFB6Q8NFQ5 453 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 OR52L2PQ8NGH6 319 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 OR8U1Q8NH10 309 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 FAM46BQ96A09 425 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 HSPB9Q9BQS6 159 aa12.08□□□□□ -0.48
TPM3-219ENST00000509409 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.08□□□□□ -0.48
TPM3-219ENST00000509409 CNOT2Q9NZN8 540 aaKnown RBP12.08□□□□□ -0.48
TPM3-219ENST00000509409 H0YHG0 523 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 LANCL1O43813 399 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 PDCD6O75340 191 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 MYF6P23409 242 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 MAPK3P27361 379 aaPredicted RBP12.07□□□□□ -0.48
TPM3-219ENST00000509409 CDX1P47902 265 aaPredicted RBP12.07□□□□□ -0.48
TPM3-219ENST00000509409 ZNF137PP52743 207 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 WNT4P56705 351 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 STEAP3Q658P3 488 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 AHSA2Q719I0 299 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 NKAIN3Q8N8D7 197 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 OR5M8Q8NGP6 311 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 THRSPQ92748 146 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 Q96M66 194 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 NEDD4LQ96PU5 975 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 UQCC2Q9BRT2 126 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 PSORS1C1Q9UIG5 152 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 ZNF107Q9UII5 783 aaPredicted RBP12.07□□□□□ -0.48
TPM3-219ENST00000509409 ERGIC3Q9Y282 383 aa12.07□□□□□ -0.48
TPM3-219ENST00000509409 CD1AP06126 327 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 SLC2A2P11168 524 aaPredicted RBP12.06□□□□□ -0.48
TPM3-219ENST00000509409 PPP1CCP36873 323 aaKnown RBP12.06□□□□□ -0.48
TPM3-219ENST00000509409 RCN1Q15293 331 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 MMDQ15546 238 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 SIGIRRQ6IA17 410 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 TMEM65Q6PI78 240 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 C5orf24Q7Z6I8 188 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 GAPTQ8N292 157 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 FAM71E2Q8N5Q1 922 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 KCTD7Q96MP8 289 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 B9D2Q9BPU9 175 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 ZNF251Q9BRH9 671 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 ABHD14AQ9BUJ0 271 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 CST11Q9H112 138 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 GHRLQ9UBU3 117 aa12.06□□□□□ -0.48
TPM3-219ENST00000509409 RAMP3O60896 148 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 SC5DO75845 299 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 RGS11O94810 467 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 IGHG4P01861 327 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 GNAO1P09471 354 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 OR5H8P0DN80 308 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 LSAMPQ13449 338 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 GNMTQ14749 295 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 ACSM3Q53FZ2 586 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 C9orf66Q5T8R8 295 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 GLT8D1Q68CQ7 371 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 NANOGP1Q8N7R0 232 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 MRPL30Q8TCC3 161 aaKnown RBP12.05□□□□□ -0.48
TPM3-219ENST00000509409 GALMQ96C23 342 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 PLCXD1Q9NUJ7 323 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 MBNL3Q9NUK0 354 aaKnown RBP12.05□□□□□ -0.48
TPM3-219ENST00000509409 JPT1Q9UK76 154 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 LRRC42Q9Y546 428 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 WSB1Q9Y6I7 421 aa12.05□□□□□ -0.48
TPM3-219ENST00000509409 UBBP0CG47 229 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 LUMP51884 338 aaPredicted RBP12.04□□□□□ -0.48
TPM3-219ENST00000509409 ACTBP60709 375 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 HTD2P86397 168 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
TPM3-219ENST00000509409 OR10K2Q6IF99 312 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 ZNF554Q86TJ5 538 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 LYPD6Q86Y78 171 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 RNF152Q8N8N0 203 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 CYYR1Q96J86 154 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 FAAP24Q9BTP7 215 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms