RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 BRD3OSQ6XYD6 125 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 Q6ZPA2 131 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 Q6ZS49 121 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 C5orf24Q7Z6I8 188 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 GVQW1Q8N7I0 195 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 OR52L2PQ8NGH6 319 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 OR10J5Q8NHC4 309 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 LEAP2Q969E1 77 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 GINS4Q9BRT9 223 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 SLC23A1Q9UHI7 598 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 ANXA10Q9UJ72 324 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 FAM96BQ9Y3D0 163 aa12.11□□□□□ -0.47
RNF4-213ENST00000509388 ZNF469Q96JG9 3925 aaPredicted RBP12.11□□□□□ -0.47
RNF4-213ENST00000509388 A0A087X0M5 115 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 A0A1B0GX30 115 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 NPFFO15130 113 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 CEACAM6P40199 344 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 GNG10P50151 68 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 LOXL3P58215 753 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 PYDC2Q56P42 97 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 RUSC1-AS1Q66K80 236 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 OR11H6Q8NGC7 330 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 OR10X1Q8NGY0 326 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 GPX8Q8TED1 209 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 CREB3L1Q96BA8 519 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 PSG11Q9UQ72 335 aa12.1□□□□□ -0.47
RNF4-213ENST00000509388 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 IGKV1D-8A0A087WSZ0 117 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 GABARAPH6UMI1 98 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 J3QR06 171 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 YPEL1O60688 119 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 FSHBP01225 129 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 EPHA1P21709 976 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 PTBP1P26599 531 aaKnown RBP eCLIP12.09□□□□□ -0.47
RNF4-213ENST00000509388 CD34P28906 385 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 RCVRNP35243 200 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 PPP1CCP36873 323 aaKnown RBP12.09□□□□□ -0.47
RNF4-213ENST00000509388 OR3A3P47888 321 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 ACTBP60709 375 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 ACTG1P63261 375 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 Q3ZCU0 254 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 MORN2Q502X0 79 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 MIDNQ504T8 468 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 IGSF11Q5DX21 431 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 ZNF626Q68DY1 528 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 HCP5Q6MZN7 132 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 CCDC190Q86UF4 302 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 OR2AK2Q8NG84 335 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 OR52I2Q8NH67 350 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 C22orf15Q8WYQ4 148 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 YPEL2Q96QA6 119 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 ZNF69Q9UC07 566 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 AMMECR1Q9Y4X0 333 aaPredicted RBP12.09□□□□□ -0.47
RNF4-213ENST00000509388 WNK2Q9Y3S1 2297 aa12.09□□□□□ -0.47
RNF4-213ENST00000509388 A0A1W2PPE3 182 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 CTDSPLO15194 276 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 CRLF1O75462 422 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 DIRAS3O95661 229 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 IL3RAP26951 378 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 HLA-DMAP28067 261 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 HTR1DP28221 377 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 SAA4P35542 130 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 CEACAM3P40198 252 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 TAS2R46P59540 309 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 GNMTQ14749 295 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 RBMS3Q6XE24 437 aaKnown RBP12.08□□□□□ -0.48
RNF4-213ENST00000509388 BEND2Q8NDZ0 799 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 EDARADDQ8WWZ3 215 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 ZDHHC16Q969W1 377 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 MMP28Q9H239 520 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 NECAP2Q9NVZ3 263 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 OR1A1Q9P1Q5 309 aa12.08□□□□□ -0.48
RNF4-213ENST00000509388 TBL2Q9Y4P3 447 aaKnown RBP12.08□□□□□ -0.48
RNF4-213ENST00000509388 RBM7Q9Y580 266 aaKnown RBP12.08□□□□□ -0.48
RNF4-213ENST00000509388 CELSR1Q9NYQ6 3014 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 TRBV6-7A0A0A0MS04 114 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 LEUTXA8MZ59 168 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 ETV6P41212 452 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 DGCR2P98153 550 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 SSBP1Q04837 148 aaKnown RBP12.07□□□□□ -0.48
RNF4-213ENST00000509388 HLA-DRB5Q30154 266 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 MINOS1Q5TGZ0 78 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 FAM53AQ6NSI3 398 aaPredicted RBP12.07□□□□□ -0.48
RNF4-213ENST00000509388 LINC00299Q6ZSB3 139 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 C8orf31Q8N9H6 132 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 OR5AP2Q8NGF4 316 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 OR5H2Q8NGV7 314 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 SOSTQ9BQB4 213 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 CABLES2Q9BTV7 478 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 OCEL1Q9H607 264 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 RDH8Q9NYR8 311 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 DPM3Q9P2X0 92 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 KLK11Q9UBX7 282 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 MTFP1Q9UDX5 166 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 MINOS1-NBL1R4GNA1 71 aa12.07□□□□□ -0.48
RNF4-213ENST00000509388 ZANQ9Y493 2812 aa12.06□□□□□ -0.48
RNF4-213ENST00000509388 IGKV1-6A0A0C4DH72 117 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms