RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 OR8H3Q8N146 312 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 TOMM40LQ969M1 308 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 RAB9BQ9NP90 201 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 PLEKHJ1Q9NW61 149 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 KCNIP1Q9NZI2 227 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 HSF4Q9ULV5 492 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 PDCD5O14737 125 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 SLC31A2O15432 143 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 VSIG10L2P0DP72 767 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 FGF9P31371 208 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 RANBP1P43487 201 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 OR10A3P58181 314 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 HTD2P86397 168 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 ZNF816Q0VGE8 651 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 PLA2G7Q13093 441 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 TMEM30BQ3MIR4 351 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 HES5Q5TA89 166 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 ZNF773Q6PK81 442 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 Q6ZPA2 131 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 SLC25A48Q6ZT89 311 aaKnown RBP12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 PRR18Q8N4B5 295 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 KLHDC1Q8N7A1 406 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 OR52L2PQ8NGH6 319 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 SLC25A33Q9BSK2 321 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 OR2S2Q9NQN1 319 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 GNG12Q9UBI6 72 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
PDLIM5-212ENST00000509333 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 IGHV1-3A0A0C4DH29 117 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 TMEM272A0A1B0GTI8 110 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 IFITM5A6NNB3 132 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 SNRNP70P08621 437 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 VEGFCP49767 419 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 HNF4GQ14541 408 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 LY6G6FQ5SQ64 297 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 HIST2H2BDQ6DRA6 164 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 Q6ZTK2 550 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 NR2C2APQ86WQ0 139 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 OR10V1Q8NGI7 309 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 OR56B4Q8NH76 319 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 FCGR1BQ92637 280 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 AKR1E2Q96JD6 320 aa12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 RIMS4Q9H426 269 aaPredicted RBP12.86□□□□□ -0.35
PDLIM5-212ENST00000509333 M0QZ24 198 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 YPEL1O60688 119 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 RAB3BP20337 219 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 PSMB9P28065 219 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 ZNF137PP52743 207 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 HMGN3Q15651 99 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 ABCA11PQ4W5N1 156 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 MOB3BQ86TA1 216 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 C11orf44Q8N8P7 122 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 ARHGAP5-AS1Q96IT6 56 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 YPEL2Q96QA6 119 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 TXNL4BQ9NX01 149 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 AK3Q9UIJ7 227 aa12.85□□□□□ -0.35
PDLIM5-212ENST00000509333 HSD17B6O14756 317 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 REG1BP48304 166 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 KCTD21Q4G0X4 260 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 PLAC9Q5JTB6 97 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 RTN4IP1Q8WWV3 396 aaPredicted RBP12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 GALMQ96C23 342 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 PECRQ9BY49 303 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 STUB1Q9UNE7 303 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 KCNK7Q9Y2U2 307 aa12.84□□□□□ -0.35
PDLIM5-212ENST00000509333 IGHV3-72A0A0B4J1Y9 119 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 SH2D7A6NKC9 451 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 ZNF736B4DX44 427 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 M0QZK8 103 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 CD28P10747 220 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 MYL9P24844 172 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 IL3RAP26951 378 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 CD1BP29016 333 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 PPP1CCP36873 323 aaKnown RBP12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 GNMTQ14749 295 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 TMEM95Q3KNT9 176 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 ODF3L1Q8IXM7 274 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 OR56B1Q8NGI3 324 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 EAF1Q96JC9 268 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 HDHD3Q9BSH5 251 aaPredicted RBP12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 OR51E2Q9H255 320 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 PLSCR3Q9NRY6 295 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 JPT1Q9UK76 154 aa12.83□□□□□ -0.36
PDLIM5-212ENST00000509333 A0A0B4J203 849 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 RAB27BO00194 218 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 LANCL1O43813 399 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 IGKV1D-33P01593 117 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 IGKV1-33P01594 117 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 LPLP06858 475 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 SLC2A2P11168 524 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 VDAC2P45880 294 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 HES1Q14469 280 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 MOGAT2Q3SYC2 334 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 TPRA1Q86W33 373 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 Q8N6K4 173 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 MMP27Q9H306 513 aa12.82□□□□□ -0.36
PDLIM5-212ENST00000509333 Q9N2K0 584 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms