RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 IGKV1D-17A0A075B6S4 117 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 TRBV6-6A0A0A6YYG2 114 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 SSSCA1O60232 199 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 SNAPC5O75971 98 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 IGLV2-14P01704 120 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 TMEM33P57088 247 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
PHF3-209ENST00000509330 MRGPRGQ86SM5 289 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 SHARPINQ9H0F6 387 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 PFDN2Q9UHV9 154 aa12.48□□□□□ -0.41
PHF3-209ENST00000509330 DPRXA6NFQ7 191 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 SERPINE2P07093 398 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
PHF3-209ENST00000509330 F2RP25116 425 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 CAV2P51636 162 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 BAP18Q8IXM2 172 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.47□□□□□ -0.41
PHF3-209ENST00000509330 RBPMSQ93062 196 aaKnown RBP12.47□□□□□ -0.41
PHF3-209ENST00000509330 ARL11Q969Q4 196 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 AQP10Q96PS8 301 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 OR2D2Q9H210 308 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 ZDHHC8Q9ULC8 765 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 FAM90A27PA6NNH2 459 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 THBDP07204 575 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 AKR1C2P52895 323 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 P2RX3P56373 397 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 NHLH2Q02577 135 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 AKR1C1Q04828 323 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 NEUROG1Q92886 237 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 GALMQ96C23 342 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 TLNRD1Q9H1K6 362 aa12.47□□□□□ -0.41
PHF3-209ENST00000509330 MBNL3Q9NUK0 354 aaKnown RBP12.47□□□□□ -0.41
PHF3-209ENST00000509330 TMA7Q9Y2S6 64 aaKnown RBP12.47□□□□□ -0.41
PHF3-209ENST00000509330 H3BP45 60 aa12.46□□□□□ -0.41
PHF3-209ENST00000509330 TNFAIP6P98066 277 aaPredicted RBP12.46□□□□□ -0.41
PHF3-209ENST00000509330 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.41
PHF3-209ENST00000509330 FAM169BQ8N8A8 192 aa12.46□□□□□ -0.41
PHF3-209ENST00000509330 ABHD14BQ96IU4 210 aa12.46□□□□□ -0.41
PHF3-209ENST00000509330 RHOFQ9HBH0 211 aa12.46□□□□□ -0.41
PHF3-209ENST00000509330 MED19A0JLT2 244 aaPredicted RBP12.46□□□□□ -0.42
PHF3-209ENST00000509330 C1QTNF9BB2RNN3 333 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 ST8SIA3O43173 380 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 C1QTNF9P0C862 333 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 SELENOVP59797 346 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 HMGN3Q15651 99 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 MOB1BQ7L9L4 216 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 FAM185AQ8N0U4 392 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 FGFRL1Q8N441 504 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 LRTM2Q8N967 370 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 LINC00052Q96N35 136 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 TMED3Q9Y3Q3 217 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 COL12A1Q99715 3063 aa12.46□□□□□ -0.42
PHF3-209ENST00000509330 FAM24AA6NFZ4 105 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 SRRM5B3KS81 715 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 CDS2O95674 445 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 IGHV1-46P01743 117 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 LYL1P12980 280 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 RND1Q92730 232 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 NINJ1Q92982 152 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 WFIKKN1Q96NZ8 548 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 REG4Q9BYZ8 158 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 RALYQ9UKM9 306 aaKnown RBP12.45□□□□□ -0.42
PHF3-209ENST00000509330 AUP1Q9Y679 476 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 SPTBN1Q01082 2364 aaKnown RBP12.45□□□□□ -0.42
PHF3-209ENST00000509330 ST8SIA5O15466 376 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 NKX2-1P43699 371 aaPredicted RBP12.45□□□□□ -0.42
PHF3-209ENST00000509330 ARHGDIBP52566 201 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 CLINT1Q14677 625 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 THOC7Q6I9Y2 204 aaKnown RBP12.45□□□□□ -0.42
PHF3-209ENST00000509330 DRAM1Q8N682 238 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 LEAP2Q969E1 77 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 HEXAP06865 529 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 HOXD4P09016 255 aaPredicted RBP12.45□□□□□ -0.42
PHF3-209ENST00000509330 OR4A8P0C604 315 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 UCP1P25874 307 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 GRNP28799 593 aaKnown RBP12.45□□□□□ -0.42
PHF3-209ENST00000509330 OR1S2Q8NGQ3 325 aa12.45□□□□□ -0.42
PHF3-209ENST00000509330 ITPR1Q14643 2758 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 TUBG1P23258 451 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 LMO1P25800 156 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 S100GP29377 79 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 CD200P41217 278 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 ZNF816Q0VGE8 651 aaPredicted RBP12.44□□□□□ -0.42
PHF3-209ENST00000509330 UTF1Q5T230 341 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 TMEM217Q8N7C4 229 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 BVESQ8NE79 360 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 DMBX1Q8NFW5 382 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 OR4D5Q8NGN0 318 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 NARS2Q96I59 477 aaKnown RBP12.44□□□□□ -0.42
PHF3-209ENST00000509330 TMEM56Q96MV1 263 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 GCM1Q9NP62 436 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 TUBG2Q9NRH3 451 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 TMEM56-RWDD3S4R434 201 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 IGLV3-9A0A075B6K5 115 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 MFSD2BA6NFX1 497 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 E5RGE8 158 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 H0Y980 276 aa12.44□□□□□ -0.42
PHF3-209ENST00000509330 RAMP3O60896 148 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms