RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SOX2P48431 317 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 ALDH3A2P51648 485 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 ACTBP60709 375 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 PITPNAQ00169 270 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 GALEQ14376 348 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 NHLRC3Q5JS37 347 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 ZNF529Q6P280 563 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 LHFPL3Q86UP9 236 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 PQLC1Q8N2U9 271 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 ANKRD60Q9BZ19 345 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 TOLLIPQ9H0E2 274 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 METTL9Q9H1A3 318 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 MRPS28Q9Y2Q9 187 aaKnown RBP12.33□□□□□ -0.44
CXCL1-202ENST00000509101 TNCP24821 2201 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 A0A1W2PN81 502 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 E9PI62 339 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 SPINT2O43291 252 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 LANCL1O43813 399 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 MT-ND4P03905 459 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 CHRNA7P36544 502 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 VEGFCP49767 419 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 NDPQ00604 133 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 MINDY2Q8NBR6 621 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 OR1L1Q8NH94 360 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 LGALS12Q96DT0 336 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 MRPL48Q96GC5 212 aaKnown RBP12.32□□□□□ -0.44
CXCL1-202ENST00000509101 RITA1Q96K30 269 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 OR4C12Q96R67 309 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 ZNF251Q9BRH9 671 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 IL36GQ9NZH8 169 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 TRAPPC2LQ9UL33 140 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 FBXO7Q9Y3I1 522 aa12.32□□□□□ -0.44
CXCL1-202ENST00000509101 A0A1W2PP11 408 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 NBR2O15453 112 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 SOX15O60248 233 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 JTBO76095 146 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 BAG2O95816 211 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 HBZP02008 142 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 RPSAP08865 295 aaKnown RBP12.31□□□□□ -0.44
CXCL1-202ENST00000509101 C5orf64Q2M2E5 130 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
CXCL1-202ENST00000509101 LYPD6Q86Y78 171 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 SGPP2Q8IWX5 399 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 C10orf67Q8IYJ2 551 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 Q8N1Y9 231 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 SYS1Q8N2H4 156 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 STX19Q8N4C7 294 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 OR4K15Q8NH41 348 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 RGP1Q92546 391 aaPredicted RBP12.31□□□□□ -0.44
CXCL1-202ENST00000509101 S100A13Q99584 98 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 SPATA25Q9BR10 227 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 JAM3Q9BX67 310 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 MRPL20Q9BYC9 149 aaKnown RBP12.31□□□□□ -0.44
CXCL1-202ENST00000509101 TPSG1Q9NRR2 321 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 C19orf73Q9NVV2 129 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 NKX1-2Q9UD57 310 aaPredicted RBP12.31□□□□□ -0.44
CXCL1-202ENST00000509101 AASSQ9UDR5 926 aa12.31□□□□□ -0.44
CXCL1-202ENST00000509101 EXOGQ9Y2C4 368 aaKnown RBP12.31□□□□□ -0.44
CXCL1-202ENST00000509101 HSPA12AO43301 675 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 IGHV3-11P01762 117 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 GNMTQ14749 295 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 TMEM30BQ3MIR4 351 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 C6orf183Q5T699 404 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 DDI2Q5TDH0 399 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 TRUB1Q8WWH5 349 aaKnown RBP12.3□□□□□ -0.44
CXCL1-202ENST00000509101 RSRP1Q9BUV0 290 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 C9orf16Q9BUW7 83 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 RAB9BQ9NP90 201 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 FOXA2Q9Y261 457 aaPredicted RBP12.3□□□□□ -0.44
CXCL1-202ENST00000509101 A3GALT2U3KPV4 340 aa12.3□□□□□ -0.44
CXCL1-202ENST00000509101 ZNF93P35789 620 aaPredicted RBP12.29□□□□□ -0.44
CXCL1-202ENST00000509101 SNRPGP62308 76 aaKnown RBP12.29□□□□□ -0.44
CXCL1-202ENST00000509101 ADARB1P78563 741 aaKnown RBP12.29□□□□□ -0.44
CXCL1-202ENST00000509101 LRRC36Q1X8D7 754 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 SLC22A6Q4U2R8 563 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 C19orf54Q5BKX5 351 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 MEDAGQ5VYS4 303 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 LIN54Q6MZP7 749 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 NABP2Q9BQ15 211 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 ABHD14AQ9BUJ0 271 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 CST11Q9H112 138 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 ETAA1Q9NY74 926 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 KIAA1456Q9P272 454 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 STUB1Q9UNE7 303 aa12.29□□□□□ -0.44
CXCL1-202ENST00000509101 A8MZ25 164 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 CD2P06729 351 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 ARSBP15848 533 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 RCC1P18754 421 aaPredicted RBP12.28□□□□□ -0.44
CXCL1-202ENST00000509101 GBX2P52951 348 aaPredicted RBP12.28□□□□□ -0.44
CXCL1-202ENST00000509101 PPP3R1P63098 170 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
CXCL1-202ENST00000509101 SLC25A30Q5SVS4 291 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 ODF3L1Q8IXM7 274 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 ABHD5Q8WTS1 349 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 TMEM106AQ96A25 262 aa12.28□□□□□ -0.44
CXCL1-202ENST00000509101 MYCBPQ99417 103 aaPredicted RBP12.28□□□□□ -0.44
CXCL1-202ENST00000509101 PAK1IP1Q9NWT1 392 aaPredicted RBP12.28□□□□□ -0.44
CXCL1-202ENST00000509101 ERVK13-1Q9NX77 482 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms