RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 DMBX1Q8NFW5 382 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 OR52M1Q8NGK5 317 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 FAM222BQ8WU58 562 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 PCNPQ8WW12 178 aaKnown RBP7.76□□□□□ -1.17
HTT-205ENST00000509043 COQ2Q96H96 371 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 OR2V2Q96R30 315 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 RAB40CQ96S21 281 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 VKORC1Q9BQB6 163 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 GINS3Q9BRX5 216 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 FAM234AQ9H0X4 552 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 C11orf1Q9H5F2 150 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 MMP26Q9NRE1 261 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 LYRM2Q9NU23 88 aaPredicted RBP7.76□□□□□ -1.17
HTT-205ENST00000509043 UFSP2Q9NUQ7 469 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 OR1A1Q9P1Q5 309 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 Q9UFV3 132 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 CACFD1Q9UGQ2 172 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 JPT1Q9UK76 154 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 RCL1Q9Y2P8 373 aaKnown RBP7.76□□□□□ -1.17
HTT-205ENST00000509043 ZFHX2Q9C0A1 2572 aaPredicted RBP7.76□□□□□ -1.17
HTT-205ENST00000509043 FAM186AA6NE01 2351 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 GVINP1Q7Z2Y8 2422 aa7.76□□□□□ -1.17
HTT-205ENST00000509043 FREM2Q5SZK8 3169 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 ZSCAN5BA6NJL1 495 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 ATP6V1G2-DDX39BF2Z307 99 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 ITGB1BP1O14713 200 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 WNT9BO14905 357 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 GFRA3O60609 400 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 ZNF737O75373 536 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 SCAF4O95104 1147 aaKnown RBP7.75□□□□□ -1.17
HTT-205ENST00000509043 HBZP02008 142 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 FAM157CP0CG43 387 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 PSG2P11465 335 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 TNFRSF1AP19438 455 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 ARHGDIBP52566 201 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 RPL23AP62750 156 aaKnown RBP7.75□□□□□ -1.17
HTT-205ENST00000509043 FAM27E3Q08E93 113 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 FAM74A1Q5RGS3 127 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 RPL7L1Q6DKI1 246 aaKnown RBP7.75□□□□□ -1.17
HTT-205ENST00000509043 ZNF561Q8N587 486 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 GCSAMQ8N6F7 178 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 CD300LFQ8TDQ1 290 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 TMED6Q8WW62 240 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 RND1Q92730 232 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 HSD17B10Q99714 261 aaKnown RBP7.75□□□□□ -1.17
HTT-205ENST00000509043 OR2S2Q9NQN1 319 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 PARP11Q9NR21 331 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 OR6C3Q9NZP0 311 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 LUZP4Q9P127 313 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 RNF7Q9UBF6 113 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 KCNS2Q9ULS6 477 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 FZR1Q9UM11 496 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 STRAPQ9Y3F4 350 aaKnown RBP7.75□□□□□ -1.17
HTT-205ENST00000509043 WSB1Q9Y6I7 421 aa7.75□□□□□ -1.17
HTT-205ENST00000509043 ODAMA1E959 279 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 LRRC30A6NM36 301 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 ZNF705EA8MWA4 302 aaPredicted RBP7.74□□□□□ -1.17
HTT-205ENST00000509043 TRIM77I1YAP6 450 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 K7N7A8 449 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 KCNAB3O43448 404 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 MED6O75586 246 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 DFFBO76075 338 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 CRYZL1O95825 349 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 IGLV2-14P01704 120 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 OR8U9P0C7N5 309 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 SPP1P10451 314 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 IRF2P14316 349 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 MUC1P15941 1255 aaPredicted RBP7.74□□□□□ -1.17
HTT-205ENST00000509043 CCKARP32238 428 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 F2RL1P55085 397 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 TNFAIP6P98066 277 aaPredicted RBP7.74□□□□□ -1.17
HTT-205ENST00000509043 EWSR1Q01844 656 aaKnown RBP eCLIP7.74□□□□□ -1.17
HTT-205ENST00000509043 AESQ08117 197 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 SWI5Q1ZZU3 235 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 MIDNQ504T8 468 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 LRP11Q86VZ4 500 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 STX12Q86Y82 276 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 SPAG16Q8N0X2 631 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 PRR18Q8N4B5 295 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 DRAM1Q8N682 238 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 CD177Q8N6Q3 437 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 GALNT11Q8NCW6 608 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 OR8U1Q8NH10 309 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 OR51H1Q8NH63 302 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 OR1L1Q8NH94 360 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 RNASE11Q8TAA1 199 aaKnown RBP7.74□□□□□ -1.17
HTT-205ENST00000509043 SNRNP40Q96DI7 357 aaKnown RBP7.74□□□□□ -1.17
HTT-205ENST00000509043 GNPNAT1Q96EK6 184 aaPredicted RBP7.74□□□□□ -1.17
HTT-205ENST00000509043 C14orf79Q96F83 325 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 SDSLQ96GA7 329 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 DMRTA2Q96SC8 542 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 MRPL37Q9BZE1 423 aaKnown RBP7.74□□□□□ -1.17
HTT-205ENST00000509043 ASF1BQ9NVP2 202 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 GAB2Q9UQC2 676 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 MMP24Q9Y5R2 645 aa7.74□□□□□ -1.17
HTT-205ENST00000509043 RIF1Q5UIP0 2472 aaKnown RBP7.73□□□□□ -1.17
HTT-205ENST00000509043 SHANK1Q9Y566 2161 aa7.73□□□□□ -1.17
HTT-205ENST00000509043 IGKV1D-17A0A075B6S4 117 aa7.73□□□□□ -1.17
HTT-205ENST00000509043 FAM90A9PA6NNJ1 464 aa7.73□□□□□ -1.17
HTT-205ENST00000509043 B8ZZF3 427 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms