RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ZNF736B4DX44 427 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 SC5DO75845 299 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 UCHL1P09936 223 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 UBBP0CG47 229 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 HTR2CP28335 458 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 ZNF134P52741 427 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 RPS27AP62979 156 aaKnown RBP11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 UNC119Q13432 240 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 BEAN1Q3B7T3 259 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 CT45A1Q5HYN5 189 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 SAMD5Q5TGI4 173 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 GAPTQ8N292 157 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 LINC00311Q8N616 119 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 ZNF439Q8NDP4 499 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 CT45A3Q8NHU0 189 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 EAF1Q96JC9 268 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 NEDD4LQ96PU5 975 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 FAAP24Q9BTP7 215 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 DUSP21Q9H596 190 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 PLGRKTQ9HBL7 147 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 KCNIP1Q9NZI2 227 aa11.74□□□□□ -0.53
UBE2D3-228ENST00000508974 SERPINE3A8MV23 424 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 CA11O75493 328 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 PF4P02776 101 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 CRHBPP24387 322 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 CHATP28329 748 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 PPP1CCP36873 323 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 C1orf100Q5SVJ3 147 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 TRAT1Q6PIZ9 186 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 TMEM91Q6ZNR0 172 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 SLC25A48Q6ZT89 311 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 TGIF2LXQ8IUE1 241 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 SETD6Q8TBK2 473 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 ST6GALNAC6Q969X2 333 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 GFI1Q99684 422 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 CHMP1AQ9HD42 196 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 RAB9BQ9NP90 201 aa11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 AK6Q9Y3D8 172 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 TSSC4Q9Y5U2 329 aaPredicted RBP11.73□□□□□ -0.53
UBE2D3-228ENST00000508974 A0A0A6YYD4 124 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 LINC01548A6NM66 108 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 SLC22A1O15245 554 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 FGF16O43320 207 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 GLAP06280 429 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 CD33P20138 364 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 BLVRBP30043 206 aaPredicted RBP11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 TPBGQ13641 420 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 SLC35E3Q7Z769 313 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 IZUMO1Q8IYV9 350 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 OR6M1Q8NGM8 313 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 OR2T10Q8NGZ9 312 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 KCNG3Q8TAE7 436 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 IL1F10Q8WWZ1 152 aa11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 MBNL3Q9NUK0 354 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-228ENST00000508974 IGLL1P15814 213 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 CPEP16870 476 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 CLDN12P56749 244 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 FABP5Q01469 135 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 MLLT11Q13015 90 aaPredicted RBP11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 TMEM30BQ3MIR4 351 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 MORN2Q502X0 79 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 PRSS48Q7RTY5 328 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 MGLLQ99685 303 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 ABHD14AQ9BUJ0 271 aa11.71□□□□□ -0.53
UBE2D3-228ENST00000508974 TMEM14DPA8MWL7 114 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 SOCS1O15524 211 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 ARL6IP5O75915 188 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 BPNT1O95861 308 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 MOSP00540 346 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 ARSBP15848 533 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 CD1BP29016 333 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 HSPA13P48723 471 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 QRFPP83859 136 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 EBI3Q14213 229 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 RAB11BQ15907 218 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 Q3ZCU0 254 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 Q6ZPA2 131 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 C18orf65Q6ZTR6 163 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 Q8N6K4 173 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 Q8N9W7 124 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 HDHD3Q9BSH5 251 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 TM2D1Q9BX74 207 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 LPAR5Q9H1C0 372 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 PLEKHJ1Q9NW61 149 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 JPT1Q9UK76 154 aa11.7□□□□□ -0.54
UBE2D3-228ENST00000508974 SLC17A2O00624 439 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 TXNL1O43396 289 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 IGHG2P01859 326 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 SLC2A2P11168 524 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 GPR12P47775 334 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 OR3A3P47888 321 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 F2RL1P55085 397 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 TRAM1Q15629 374 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 HMGN3Q15651 99 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 KPRPQ5T749 579 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 HES5Q5TA89 166 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms