RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 ZBTB25P24278 435 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 IER3P46695 156 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 RAB7AP51149 207 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 DYNLT3P51808 116 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 EFNB2P52799 333 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 TMEM50BP56557 158 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 GNG2P59768 71 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ACTG1P63261 375 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 HLA-DRB3P79483 266 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 SRSF2Q01130 221 aaKnown RBP7.42□□□□□ -1.22
NUP54-207ENST00000508583 PRB3Q04118 309 aaPredicted RBP7.42□□□□□ -1.22
NUP54-207ENST00000508583 SLC9A3R2Q15599 337 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 HMGN3Q15651 99 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 SSX2Q16385 188 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 PNLIPRP3Q17RR3 467 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 PLAC9Q5JTB6 97 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 LY6G6FQ5SQ64 297 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
NUP54-207ENST00000508583 HACD4Q5VWC8 232 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ZNF880Q6PDB4 577 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 C16orf87Q6PH81 154 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 LINC00311Q8N616 119 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 SAMD12Q8N8I0 201 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ZDHHC22Q8N966 263 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 OR4P4Q8NGL7 312 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 IL1F10Q8WWZ1 152 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 EDARADDQ8WWZ3 215 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 SSX3Q99909 188 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ABCG5Q9H222 651 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 GHITMQ9H3K2 345 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ZNF286AQ9HBT8 521 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 Q9N2K0 584 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ADAM30Q9UKF2 790 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 VPREB3Q9UKI3 123 aa7.42□□□□□ -1.22
NUP54-207ENST00000508583 ATRQ13535 2644 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 TRAV39A0A0B4J263 110 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 MDFIC2A0A1B0GVS7 189 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 FAM172BPA6NC97 362 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 CCDC160A6NGH7 325 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 TRDCB7Z8K6 153 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 XRCC3O43542 346 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 YPEL1O60688 119 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 VENTXO95231 258 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 APOA1P02647 267 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 FCGR3AP08637 254 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 CTXN2P0C2S0 81 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 CBX5P45973 191 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 GNG10P50151 68 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 LOXL3P58215 753 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 MOGAT2Q3SYC2 334 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 CDNFQ49AH0 187 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 TMEM69Q5SWH9 247 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 Q6ZS49 121 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 OR8H3Q8N146 312 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 OR2AK2Q8NG84 335 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 OR4A4PQ8NGN8 299 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 C15orf40Q8WUR7 153 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 TOMM40LQ969M1 308 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 AKR1E2Q96JD6 320 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 YPEL2Q96QA6 119 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 OCSTAMPQ9BR26 566 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 ESM1Q9NQ30 184 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 PSG11Q9UQ72 335 aa7.41□□□□□ -1.22
NUP54-207ENST00000508583 SOX21Q9Y651 276 aaPredicted RBP7.41□□□□□ -1.22
NUP54-207ENST00000508583 FBN1P35555 2871 aaKnown RBP7.4□□□□□ -1.22
NUP54-207ENST00000508583 TMEM235A6NFC5 223 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 H3BUX3 64 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 ZNF701M0R085 212 aaPredicted RBP7.4□□□□□ -1.22
NUP54-207ENST00000508583 ITGB1BP1O14713 200 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 IGHV4-59P01825 116 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 FAM106CPP0CH98 169 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 TGFBR1P36897 503 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 GDNFP39905 211 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 PLA2G7Q13093 441 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 MORN2Q502X0 79 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 TPTE2P1Q5T6R2 138 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 DHRS7BQ6IAN0 325 aaPredicted RBP7.4□□□□□ -1.22
NUP54-207ENST00000508583 SLC25A48Q6ZT89 311 aaKnown RBP7.4□□□□□ -1.22
NUP54-207ENST00000508583 LHFPL4Q7Z7J7 247 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 OR5H6Q8NGV6 325 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 OR1L1Q8NH94 360 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 CAPSLQ8WWF8 208 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 ISOC1Q96CN7 298 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 SLC25A38Q96DW6 304 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 ABHD14AQ9BUJ0 271 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 NAA50Q9GZZ1 169 aaKnown RBP7.4□□□□□ -1.22
NUP54-207ENST00000508583 CCDC59Q9P031 241 aaKnown RBP7.4□□□□□ -1.22
NUP54-207ENST00000508583 COMMD3Q9UBI1 195 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 KCNK7Q9Y2U2 307 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 HILPDAQ9Y5L2 63 aa7.4□□□□□ -1.22
NUP54-207ENST00000508583 TRAV18A0A075B6X5 111 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 A0A1B0GUS0 222 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 FABP7O15540 132 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 TPPPO94811 219 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 GAPDHP04406 335 aaKnown RBP7.39□□□□□ -1.23
NUP54-207ENST00000508583 ZNF137PP52743 207 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 ZNF816Q0VGE8 651 aaPredicted RBP7.39□□□□□ -1.23
NUP54-207ENST00000508583 FOXL1Q12952 345 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 ZNF260Q3ZCT1 412 aa7.39□□□□□ -1.23
NUP54-207ENST00000508583 FAM71F2Q6NXP2 309 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms