RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ZNF736B4DX44 427 aaPredicted RBP7.23□□□□□ -1.25
NEDD9-211ENST00000508546 LINC01619G3V211 115 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 G3V318 75 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 MRPS14O60783 128 aaKnown RBP7.23□□□□□ -1.25
NEDD9-211ENST00000508546 IFNA6P05013 189 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 ALDH3B2P48448 385 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 IL13RA2Q14627 380 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 NEDD8Q15843 81 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 SLC25A30Q5SVS4 291 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 PRSS48Q7RTY5 328 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 SGPP2Q8IWX5 399 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 SPARTQ8N0X7 666 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 SVOPQ8N4V2 548 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 PXT1Q8NFP0 134 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 OR2G2Q8NGZ5 317 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 PLPPR1Q8TBJ4 325 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 ARPC1AQ92747 370 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 OR4C12Q96R67 309 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 FAM192AQ9GZU8 254 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 TOLLIPQ9H0E2 274 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 ZCCHC4Q9H5U6 513 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 FKBP14Q9NWM8 211 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 GFOD1Q9NXC2 390 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 CNOT2Q9NZN8 540 aaKnown RBP7.23□□□□□ -1.25
NEDD9-211ENST00000508546 PSORS1C1Q9UIG5 152 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 WSB1Q9Y6I7 421 aa7.23□□□□□ -1.25
NEDD9-211ENST00000508546 MUC4Q99102 2169 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 TRAV41A0A0B4J266 112 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 SNTNA6NMZ2 147 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 C15orf65H3BRN8 121 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 ARPC1BO15143 372 aaKnown RBP7.22□□□□□ -1.25
NEDD9-211ENST00000508546 ATP6V0E1O15342 81 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 FADS2O95864 444 aaKnown RBP7.22□□□□□ -1.25
NEDD9-211ENST00000508546 IGLV1-51P01701 117 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 HLA-DRB1P01911 266 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 CDK1P06493 297 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 TMEM225BP0DP42 221 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 SLC2A2P11168 524 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-211ENST00000508546 PITPNAQ00169 270 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 KISS1Q15726 138 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 HAGHQ16775 308 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 XAF1Q6GPH4 301 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 FDX2Q6P4F2 183 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 FAM220AQ7Z4H9 259 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 GPR141Q7Z602 305 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 STX19Q8N4C7 294 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 MINDY2Q8NBR6 621 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 OR13C9Q8NGT0 318 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 ALX4Q9H161 411 aaPredicted RBP7.22□□□□□ -1.25
NEDD9-211ENST00000508546 AMBNQ9NP70 447 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 NDUFA13Q9P0J0 144 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 FRRS1LQ9P0K9 344 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 GNG8Q9UK08 70 aa7.22□□□□□ -1.25
NEDD9-211ENST00000508546 RPL36Q9Y3U8 105 aaKnown RBP7.22□□□□□ -1.25
NEDD9-211ENST00000508546 IGHV4OR15-8A0A075B7B6 117 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 A0A087WW49 117 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 IGHV7-81A0A0B4J1V7 117 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 TRAV39A0A0B4J263 110 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 SDCBPO00560 298 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-211ENST00000508546 ORC5O43913 435 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 LGALS1P09382 135 aaKnown RBP7.21□□□□□ -1.26
NEDD9-211ENST00000508546 CCR9P51686 369 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF85Q03923 595 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 ST3GAL4Q11206 333 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 MMDQ15546 238 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 TBCEQ15813 527 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-211ENST00000508546 TP53I3Q53FA7 332 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 C19orf54Q5BKX5 351 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 SLC25A48Q6ZT89 311 aaKnown RBP7.21□□□□□ -1.26
NEDD9-211ENST00000508546 KCTD20Q7Z5Y7 419 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 ZNF439Q8NDP4 499 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 OR10H4Q8NGA5 316 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 OR51A4Q8NGJ6 313 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 OR13C3Q8NGS6 347 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 OR10AC1Q8NH08 325 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 LINC00476Q8WZB0 136 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 FCGR1BQ92637 280 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 GGHQ92820 318 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 RFKQ969G6 155 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 ARL11Q969Q4 196 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 MUL1Q969V5 352 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 FLYWCH2Q96CP2 140 aaKnown RBP7.21□□□□□ -1.26
NEDD9-211ENST00000508546 DPCDQ9BVM2 203 aaPredicted RBP7.21□□□□□ -1.26
NEDD9-211ENST00000508546 RBM38Q9H0Z9 239 aaKnown RBP7.21□□□□□ -1.26
NEDD9-211ENST00000508546 IFT22Q9H7X7 185 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 STUB1Q9UNE7 303 aa7.21□□□□□ -1.26
NEDD9-211ENST00000508546 TMEM30CPA0ZSE6 113 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 IRGMA1A4Y4 181 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 CCDC160A6NGH7 325 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 SOX15O60248 233 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 HSPB1P04792 205 aaKnown RBP7.2□□□□□ -1.26
NEDD9-211ENST00000508546 ARSBP15848 533 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 MAP2K4P45985 399 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 CRIP2P52943 208 aaPredicted RBP7.2□□□□□ -1.26
NEDD9-211ENST00000508546 NANOS3P60323 173 aaKnown RBP7.2□□□□□ -1.26
NEDD9-211ENST00000508546 TMED1Q13445 227 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 LSAMPQ13449 338 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 SUMF2Q8NBJ7 301 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 OR13F1Q8NGS4 319 aa7.2□□□□□ -1.26
NEDD9-211ENST00000508546 ELOVL1Q9BW60 279 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms