RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RAB7AP51149 207 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 VBP1P61758 197 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 RPS25P62851 125 aaKnown RBP12.83□□□□□ -0.36
LMNA-222ENST00000508500 ZNF816Q0VGE8 651 aaPredicted RBP12.83□□□□□ -0.36
LMNA-222ENST00000508500 EBI3Q14213 229 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 HNF4GQ14541 408 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 GLIPR1L1Q6UWM5 242 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 C5orf24Q7Z6I8 188 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 OR8H3Q8N146 312 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 LINC00311Q8N616 119 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 OR52M1Q8NGK5 317 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 ST6GALNAC6Q969X2 333 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 NOL4LQ96MY1 436 aaPredicted RBP12.83□□□□□ -0.36
LMNA-222ENST00000508500 DERL3Q96Q80 235 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 S100A13Q99584 98 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 DCSTAMPQ9H295 470 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 PCDHB16Q9NRJ7 776 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 GFOD1Q9NXC2 390 aa12.83□□□□□ -0.36
LMNA-222ENST00000508500 MRPS28Q9Y2Q9 187 aaKnown RBP12.83□□□□□ -0.36
LMNA-222ENST00000508500 IGHV1-3A0A0C4DH29 117 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 HSD17B6O14756 317 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 ORC5O43913 435 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 TMEM127O75204 238 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 ZNF780AO75290 641 aaPredicted RBP12.82□□□□□ -0.36
LMNA-222ENST00000508500 ARL6IP5O75915 188 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 MAS1P04201 325 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 TMEM11P17152 192 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 FABP5Q01469 135 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 HES1Q14469 280 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 INSL4Q14641 139 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 SPCS2Q15005 226 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 SIGIRRQ6IA17 410 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 UNQ9370/PRO34162Q6UXP9 181 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 C18orf65Q6ZTR6 163 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 ZNF329Q86UD4 541 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 GAPTQ8N292 157 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 Q8N6K4 173 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 TMEM104Q8NE00 496 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 TSC22D3Q99576 134 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 CENPOQ9BU64 300 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 BANF2Q9H503 90 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 NECAP2Q9NVZ3 263 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 CCDC59Q9P031 241 aaKnown RBP12.82□□□□□ -0.36
LMNA-222ENST00000508500 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 DNAH9Q9NYC9 4486 aa12.82□□□□□ -0.36
LMNA-222ENST00000508500 IGHV3-72A0A0B4J1Y9 119 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 PSMB11A5LHX3 300 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 C12orf77C9JDV5 145 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 SDCBPO00560 298 aaPredicted RBP12.81□□□□□ -0.36
LMNA-222ENST00000508500 PF4V1P10720 104 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 CD33P20138 364 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 SOX6P35712 828 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 ZNF134P52741 427 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 NCS1P62166 190 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 ETV3LQ6ZN32 361 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 REC114Q7Z4M0 266 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 TPRA1Q86W33 373 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 JAGN1Q8N5M9 183 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 ZNF439Q8NDP4 499 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 OR4X2Q8NGF9 303 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 OR10X1Q8NGY0 326 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 OR4K15Q8NH41 348 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 NEK7Q8TDX7 302 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 EAF1Q96JC9 268 aaPredicted RBP12.81□□□□□ -0.36
LMNA-222ENST00000508500 TMED9Q9BVK6 235 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 NBEAL2Q6ZNJ1 2754 aa12.81□□□□□ -0.36
LMNA-222ENST00000508500 ZNF736B4DX44 427 aaPredicted RBP12.8□□□□□ -0.36
LMNA-222ENST00000508500 AIPO00170 330 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 FGF16O43320 207 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 IGHG2P01859 326 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 GAPDHP04406 335 aaKnown RBP12.8□□□□□ -0.36
LMNA-222ENST00000508500 ZNF182P17025 639 aaPredicted RBP12.8□□□□□ -0.36
LMNA-222ENST00000508500 LSM3P62310 102 aaKnown RBP12.8□□□□□ -0.36
LMNA-222ENST00000508500 GPR176Q14439 515 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 ACSM3Q53FZ2 586 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 RAB12Q6IQ22 244 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 MOB3BQ86TA1 216 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 CROCCP3Q8IVE0 287 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 CDH26Q8IXH8 852 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 C8orf31Q8N9H6 132 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 MRAPQ8TCY5 172 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 TMEM203Q969S6 136 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 PLSCR3Q9NRY6 295 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 CKLFQ9UBR5 152 aa12.8□□□□□ -0.36
LMNA-222ENST00000508500 TRAV1-2A0A0B4J238 106 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 UCHL1P09936 223 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 MGMTP16455 207 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 RCC1P18754 421 aaPredicted RBP12.79□□□□□ -0.36
LMNA-222ENST00000508500 LSAMPQ13449 338 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 CT45A1Q5HYN5 189 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 AWAT2Q6E213 333 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 IZUMO1Q8IYV9 350 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 LINC00482Q8N8I6 264 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 CT45A3Q8NHU0 189 aa12.79□□□□□ -0.36
LMNA-222ENST00000508500 RTN4IP1Q8WWV3 396 aaPredicted RBP12.79□□□□□ -0.36
LMNA-222ENST00000508500 MRPS24Q96EL2 167 aaKnown RBP12.79□□□□□ -0.36
LMNA-222ENST00000508500 Q96M66 194 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms