RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CRYBB3P26998 211 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 CA7P43166 264 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 EFNB2P52799 333 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 UCNP55089 124 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 ERVK11-1P61568 191 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 KIAA1644Q3SXP7 199 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 CLEC12AQ5QGZ9 265 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 FAM162BQ5T6X4 162 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 ACSM2BQ68CK6 577 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 SLC25A34Q6PIV7 304 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 OR51E1Q8TCB6 317 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 DIO2Q92813 273 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 FAM3DQ96BQ1 224 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 TSSK2Q96PF2 358 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 LMF2Q9BU23 707 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 GGTLC1Q9BX51 225 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 C5orf66Q9H5L9 145 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 CALHM2Q9HA72 323 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 TMEM160Q9NX00 188 aa9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 RALYQ9UKM9 306 aaKnown RBP9.27□□□□□ -0.93
PDLIM5-210ENST00000508216 TNFRSF10CO14798 259 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 AREGP15514 252 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 FSTP19883 344 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 FRKP42685 505 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 EWSR1Q01844 656 aaKnown RBP eCLIP9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 PLXDC2Q6UX71 529 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 CA13Q8N1Q1 262 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 ZADH2Q8N4Q0 377 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 LINC01555Q8NAE3 123 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 OR10AG1Q8NH19 301 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 SMIM7Q9BQ49 75 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 PIMREGQ9BSJ6 248 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 VN1R3Q9BXE9 311 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 SMIM3Q9BZL3 60 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 COA1Q9GZY4 146 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 PLEKHF2Q9H8W4 249 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 SPANXCQ9NY87 97 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 EHFQ9NZC4 300 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 MED31Q9Y3C7 131 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 LINC00312Q9Y6C7 94 aa9.26□□□□□ -0.93
PDLIM5-210ENST00000508216 A0A1B0GUS0 222 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 LOC102725191A0A1B0GVB3 256 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 MEIS3P1A6NDR6 274 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 GRXCR1A8MXD5 290 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 PHF1O43189 567 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 MSCO60682 206 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF324O75467 553 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 SLC25A6P12236 298 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 SLC6A6P31641 620 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 ECI1P42126 302 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 OR1D4P47884 311 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 FOXG1P55316 489 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 TCTAP57738 103 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 ROM1Q03395 351 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 LY6DQ14210 128 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 OR1Q1Q15612 314 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 PEAR1Q5VY43 1037 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 Q6ZS92 163 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 LHFPL1Q86WI0 220 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 FBXL14Q8N1E6 418 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 SCCPDHQ8NBX0 429 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 KCNG3Q8TAE7 436 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 FNDC9Q8TBE3 224 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 MRPL30Q8TCC3 161 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 PDCD1LG2Q9BQ51 273 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 MS4A6AQ9H2W1 248 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 PPDPFQ9H3Y8 114 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 NXT1Q9UKK6 140 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 COL18A1P39060 1754 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF831Q5JPB2 1677 aa9.25□□□□□ -0.93
PDLIM5-210ENST00000508216 NSG1A0A0A6YYJ2 146 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 A0A1W2PPM0 123 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 H7C1C5 153 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 SAP18O00422 153 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 GPR1P46091 355 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 VEGFBP49765 207 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 TMPRSS3P57727 454 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 RAE1P78406 368 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 PDCD1Q15116 288 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 NRN1LQ496H8 165 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF684Q5T5D7 378 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 SUSD4Q5VX71 490 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 GLIPR1L1Q6UWM5 242 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ERASQ7Z444 233 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 BAGE3Q86Y29 109 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 BAGE2Q86Y30 109 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ATP6V0E2Q8NHE4 81 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF296Q8WUU4 475 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 TMEM54Q969K7 222 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 JMJD8Q96S16 334 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 GPER1Q99527 375 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 EBPLQ9BY08 206 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 OR2D2Q9H210 308 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 TAAR3PQ9P1P4 343 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 CLCF1Q9UBD9 225 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 THSD7AQ9UPZ6 1657 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 DOCK6Q96HP0 2047 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 A0A1W2PRE2 83 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms