RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 OR1L1Q8NH94 360 aa12.55□□□□□ -0.4
COL1A1-211ENST00000507689 MRPL30Q8TCC3 161 aaKnown RBP12.55□□□□□ -0.4
COL1A1-211ENST00000507689 IL1F10Q8WWZ1 152 aa12.55□□□□□ -0.4
COL1A1-211ENST00000507689 RBM14Q96PK6 669 aaKnown RBP12.55□□□□□ -0.4
COL1A1-211ENST00000507689 NICN1Q9BSH3 213 aa12.55□□□□□ -0.4
COL1A1-211ENST00000507689 KCNK15Q9H427 330 aa12.55□□□□□ -0.4
COL1A1-211ENST00000507689 MBNL3Q9NUK0 354 aaKnown RBP12.55□□□□□ -0.4
COL1A1-211ENST00000507689 JPT1Q9UK76 154 aa12.55□□□□□ -0.4
COL1A1-211ENST00000507689 IFITM5A6NNB3 132 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 SNRNP70P08621 437 aaKnown RBP12.54□□□□□ -0.4
COL1A1-211ENST00000507689 LOXL3P58215 753 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 QRFPP83859 136 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 HTD2P86397 168 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
COL1A1-211ENST00000507689 NEDD8Q15843 81 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 TREML4Q6UXN2 200 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 TPRA1Q86W33 373 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 TGIF2LXQ8IUE1 241 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 LPAR5Q9H1C0 372 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 ZNF702PQ9H963 129 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 C12orf4Q9NQ89 552 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 HSF4Q9ULV5 492 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 MOB4Q9Y3A3 225 aa12.54□□□□□ -0.4
COL1A1-211ENST00000507689 TENM1Q9UKZ4 2725 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 HSPA12AO43301 675 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 TNFAIP8O95379 198 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 CD3GP09693 182 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 FGF9P31371 208 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-211ENST00000507689 ABCA11PQ4W5N1 156 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 LYG1Q8N1E2 194 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 Q8N2B8 174 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 FAM89BQ8N5H3 189 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 OR2AK2Q8NG84 335 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 KCTD7Q96MP8 289 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 GFI1Q99684 422 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 CMSS1Q9BQ75 279 aaKnown RBP12.53□□□□□ -0.4
COL1A1-211ENST00000507689 ABHD14AQ9BUJ0 271 aa12.53□□□□□ -0.4
COL1A1-211ENST00000507689 TXNL4BQ9NX01 149 aaKnown RBP12.53□□□□□ -0.4
COL1A1-211ENST00000507689 IGHV1-3A0A0C4DH29 117 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 SOCS1O15524 211 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 FBXO24O75426 580 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 IGKV1D-33P01593 117 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 IGKV1-33P01594 117 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 CSF1P09603 554 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 REG1BP48304 166 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 OR10A3P58181 314 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 BLCAPP62952 87 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 HNF4GQ14541 408 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 ARL6IP1Q15041 203 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 TIMM50Q3ZCQ8 353 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 MORN2Q502X0 79 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 UTF1Q5T230 341 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 SLC25A48Q6ZT89 311 aaKnown RBP12.52□□□□□ -0.41
COL1A1-211ENST00000507689 CENPVQ7Z7K6 275 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-211ENST00000507689 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 PHF21AQ96BD5 680 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 AK3Q9UIJ7 227 aa12.52□□□□□ -0.41
COL1A1-211ENST00000507689 A0A087WXM4 84 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 TMEM272A0A1B0GTI8 110 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 A0A1W2PPI3 338 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 NCBP2LA6PVI3 153 aaKnown RBP12.51□□□□□ -0.41
COL1A1-211ENST00000507689 NOTOA8MTQ0 251 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 YPEL1O60688 119 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 RAB6AP20340 208 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 TALDO1P37837 337 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 HABP2Q14520 560 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-211ENST00000507689 OR52L2PQ8NGH6 319 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 RTN4IP1Q8WWV3 396 aaPredicted RBP12.51□□□□□ -0.41
COL1A1-211ENST00000507689 ARHGAP5-AS1Q96IT6 56 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 YPEL2Q96QA6 119 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 CHCHD6Q9BRQ6 235 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 PECRQ9BY49 303 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 MMP27Q9H306 513 aa12.51□□□□□ -0.41
COL1A1-211ENST00000507689 FBN3Q75N90 2809 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 A0A0A6YYD4 124 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 SCGNO76038 276 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 NAPSAO96009 420 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 CD36P16671 472 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 ZBTB25P24278 435 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 CD1BP29016 333 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 PPP1CCP36873 323 aaKnown RBP12.5□□□□□ -0.41
COL1A1-211ENST00000507689 HMGN3Q15651 99 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 CT45A1Q5HYN5 189 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 C11orf44Q8N8P7 122 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 TSPAN14Q8NG11 270 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 OR10R2Q8NGX6 335 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 CT45A3Q8NHU0 189 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 EDARADDQ8WWZ3 215 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 PTX4Q96A99 478 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 CENPOQ9BU64 300 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 ATG5Q9H1Y0 275 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 ANK2Q01484 3957 aa12.5□□□□□ -0.41
COL1A1-211ENST00000507689 A0A075B6Q4 140 aa12.49□□□□□ -0.41
COL1A1-211ENST00000507689 TRBV6-6A0A0A6YYG2 114 aa12.49□□□□□ -0.41
COL1A1-211ENST00000507689 IGHV3-72A0A0B4J1Y9 119 aa12.49□□□□□ -0.41
COL1A1-211ENST00000507689 FAM90A9PA6NNJ1 464 aa12.49□□□□□ -0.41
COL1A1-211ENST00000507689 FGF16O43320 207 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms