RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 OR5AK3PQ8NH89 298 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 C1QTNF6Q9BXI9 259 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 C16orf95Q9H693 158 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 TMEM216Q9P0N5 145 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 CD300AQ9UGN4 299 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 WASHC3Q9Y3C0 194 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 GMEB1Q9Y692 573 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 LTBP2Q14767 1821 aa1.42□□□□□ -2.18
LSM6-205ENST00000507449 KMT2EQ8IZD2 1858 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 TMEM213A2RRL7 107 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 C17orf51A8MQB3 221 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 F8VZ95 297 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 H3BSA7 217 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 K7EQS6 105 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 TOX3O15405 576 aaPredicted RBP1.41□□□□□ -2.18
LSM6-205ENST00000507449 PLXNB1O43157 2135 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 DENRO43583 198 aaKnown RBP1.41□□□□□ -2.18
LSM6-205ENST00000507449 CRYGDP07320 174 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 CBR1P16152 277 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 ADORA1P30542 326 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 PSMB3P49720 205 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 LINC00313P59037 77 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 C4orf26Q17RF5 130 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 SPATA31B1PQ5VZV4 182 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 TTC33Q6PID6 262 aaPredicted RBP1.41□□□□□ -2.18
LSM6-205ENST00000507449 SDIM1Q6ZPB5 146 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 ZBTB8OSQ8IWT0 167 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 ZNF567Q8N184 647 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 OR8K1Q8NGG5 319 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 OR5C1Q8NGR4 320 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 OR5K1Q8NHB7 308 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 CCDC12Q8WUD4 166 aaPredicted RBP1.41□□□□□ -2.18
LSM6-205ENST00000507449 PPWD1Q96BP3 646 aaKnown RBP1.41□□□□□ -2.18
LSM6-205ENST00000507449 GPR22Q99680 433 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 UPK3BQ9BT76 320 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 CFAP45Q9UL16 551 aa1.41□□□□□ -2.18
LSM6-205ENST00000507449 MRPS16Q9Y3D3 137 aaKnown RBP1.41□□□□□ -2.18
LSM6-205ENST00000507449 YLPM1P49750 1951 aaKnown RBP1.41□□□□□ -2.18
LSM6-205ENST00000507449 ADAMTSL1Q8N6G6 1762 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 A8MWP6 167 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 M0QYV0 167 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 TOR1AO14656 332 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 CYTH3O43739 400 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 DEDDO75618 318 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 FBP1P09467 338 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 PVALBP20472 110 aaPredicted RBP1.4□□□□□ -2.19
LSM6-205ENST00000507449 PSMB6P28072 239 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 GRPRP30550 384 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 CD151P48509 253 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 HTR4Q13639 388 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 LRRC26Q2I0M4 334 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 SPIN4Q56A73 249 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 MESTQ5EB52 335 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 FAM45BPQ6NSW5 357 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 RIBC1Q8N443 379 aaPredicted RBP1.4□□□□□ -2.19
LSM6-205ENST00000507449 LFNGQ8NES3 379 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 OR7G1Q8NGA0 311 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 OR5L1Q8NGL2 311 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 TNFAIP8L1Q8WVP5 186 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 LRRC45Q96CN5 670 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 STACQ99469 402 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 EBNA1BP2Q99848 306 aaKnown RBP1.4□□□□□ -2.19
LSM6-205ENST00000507449 ZNF251Q9BRH9 671 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 GNB1LQ9BYB4 327 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 BCL2L14Q9BZR8 327 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 AICDAQ9GZX7 198 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 EURLQ9NYK6 297 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 LINC00527Q9UJ94 153 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 CCL26Q9Y258 94 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 MMACHCQ9Y4U1 282 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 HEY1Q9Y5J3 304 aa1.4□□□□□ -2.19
LSM6-205ENST00000507449 DHX57Q6P158 1386 aaKnown RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 C19orf71A6NCJ1 209 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 ODF3BA8MYP8 253 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 F5H5T6 163 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 GOLGA8RI6L899 631 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 TP53I11O14683 189 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 LIN7AO14910 233 aaPredicted RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 ZNF189O75820 626 aaPredicted RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 SOD1P00441 154 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 ORM1P02763 201 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 IGHV3-30-3P0DP02 117 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 ORM2P19652 201 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 CSRP1P21291 193 aaKnown RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 CASQ1P31415 396 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 PSMD8P48556 350 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 CLDN12P56749 244 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 ACTBP60709 375 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 ACTG1P63261 375 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 C1DQ13901 141 aaKnown RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 PDK2Q15119 407 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 MAPK14Q16539 360 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 EXOC3L4Q17RC7 722 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 SLC13A5Q86YT5 568 aaPredicted RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 DNAAF3Q8N9W5 541 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 ATP6V1C2Q8NEY4 427 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 STOML3Q8TAV4 291 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 CHMP4BQ9H444 224 aaKnown RBP1.39□□□□□ -2.19
LSM6-205ENST00000507449 WDR54Q9H977 334 aa1.39□□□□□ -2.19
LSM6-205ENST00000507449 TAS2R9Q9NYW1 312 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms