RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 HMGN3Q15651 99 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 LTC4SQ16873 150 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 UTF1Q5T230 341 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 LGI3Q8N145 548 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 LRTM2Q8N967 370 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 CCDC71LQ8N9Z2 235 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 NEUROG1Q92886 237 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 C5orf30Q96GV9 206 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 SMIM3Q9BZL3 60 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 OR2S2Q9NQN1 319 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 TUBD1Q9UJT1 453 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 WIPI2Q9Y4P8 454 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 PKD1L2Q7Z442 2459 aa10.21□□□□□ -0.77
LIN54-206ENST00000506560 ACAA1P09110 424 aaPredicted RBP10.21□□□□□ -0.78
LIN54-206ENST00000506560 HKR1P10072 659 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 TUBG1P23258 451 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 GRNP28799 593 aaKnown RBP10.21□□□□□ -0.78
LIN54-206ENST00000506560 CD80P33681 288 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 CEACAM6P40199 344 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 MDH2P40926 338 aaKnown RBP10.21□□□□□ -0.78
LIN54-206ENST00000506560 CD200P41217 278 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 SELENOHQ8IZQ5 122 aaKnown RBP10.21□□□□□ -0.78
LIN54-206ENST00000506560 FGFRL1Q8N441 504 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 WFIKKN1Q96NZ8 548 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 TUBG2Q9NRH3 451 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 JKAMPQ9P055 326 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 ARFGEF3Q5TH69 2177 aa10.21□□□□□ -0.78
LIN54-206ENST00000506560 RAI1Q7Z5J4 1906 aaPredicted RBP10.21□□□□□ -0.78
LIN54-206ENST00000506560 DEFB108AA8MXU0 73 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 SRRM5B3KS81 715 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 K7EPK0 472 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 DEDDO75618 318 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 IGHV3-7P01780 117 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 HEXAP06865 529 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 CTXN2P0C2S0 81 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 PRDX2P32119 198 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 SMIM21Q3B7S5 101 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 SHEQ5VZ18 495 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 FAM71E2Q8N5Q1 922 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 OR10V1Q8NGI7 309 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 RBMXL1Q96E39 390 aaKnown RBP10.2□□□□□ -0.78
LIN54-206ENST00000506560 ARPC5LQ9BPX5 153 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 KCNS2Q9ULS6 477 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 DOCK11Q5JSL3 2073 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 TMEM30CPA0ZSE6 113 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 SIGLEC5O15389 551 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 ZNF737O75373 536 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 CYB5R3P00387 301 aaPredicted RBP10.2□□□□□ -0.78
LIN54-206ENST00000506560 HBZP02008 142 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 ASCL1P50553 236 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 KRBOX4Q5JUW0 171 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 DEFB108BQ8NET1 73 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 ERGIC1Q969X5 290 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 PIGMQ9H3S5 423 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 A8MXK9 166 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 ADAM20O43506 726 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 PPP1CCP36873 323 aaKnown RBP10.2□□□□□ -0.78
LIN54-206ENST00000506560 CCL8P80075 99 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 FIP1L1Q6UN15 594 aaKnown RBP10.2□□□□□ -0.78
LIN54-206ENST00000506560 DNAJB11Q9UBS4 358 aa10.2□□□□□ -0.78
LIN54-206ENST00000506560 RBM7Q9Y580 266 aaKnown RBP10.2□□□□□ -0.78
LIN54-206ENST00000506560 COL12A1Q99715 3063 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 YLPM1P49750 1951 aaKnown RBP10.19□□□□□ -0.78
LIN54-206ENST00000506560 IGKV1-39P01597 117 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 IGKV1D-39P04432 117 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 ZNF16P17020 682 aaPredicted RBP10.19□□□□□ -0.78
LIN54-206ENST00000506560 RND3P61587 244 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 UBA52P62987 128 aaKnown RBP10.19□□□□□ -0.78
LIN54-206ENST00000506560 CXorf66Q5JRM2 361 aaPredicted RBP10.19□□□□□ -0.78
LIN54-206ENST00000506560 RPL7L1Q6DKI1 246 aaKnown RBP10.19□□□□□ -0.78
LIN54-206ENST00000506560 ZNF695Q8IW36 515 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 AQP10Q96PS8 301 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 GCM1Q9NP62 436 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 PFDN2Q9UHV9 154 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 CACNA1AO00555 2505 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 DSCAML1Q8TD84 2053 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 CDS2O95674 445 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 EPHA1P21709 976 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 OMGP23515 440 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 F2RP25116 425 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 ADIPOQQ15848 244 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 BVESQ8NE79 360 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 DMBX1Q8NFW5 382 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 TMED6Q8WW62 240 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 RND1Q92730 232 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 TMEM56Q96MV1 263 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 MED9Q9NWA0 146 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 RCL1Q9Y2P8 373 aaKnown RBP10.19□□□□□ -0.78
LIN54-206ENST00000506560 TMEM56-RWDD3S4R434 201 aa10.19□□□□□ -0.78
LIN54-206ENST00000506560 NPIPB11E5RHQ5 1161 aa10.18□□□□□ -0.78
LIN54-206ENST00000506560 DLL1O00548 723 aa10.18□□□□□ -0.78
LIN54-206ENST00000506560 FGF2P09038 288 aa10.18□□□□□ -0.78
LIN54-206ENST00000506560 UCP1P25874 307 aa10.18□□□□□ -0.78
LIN54-206ENST00000506560 POLR2GP62487 172 aaKnown RBP eCLIP10.18□□□□□ -0.78
LIN54-206ENST00000506560 TNFAIP6P98066 277 aaPredicted RBP10.18□□□□□ -0.78
LIN54-206ENST00000506560 LY6DQ14210 128 aa10.18□□□□□ -0.78
LIN54-206ENST00000506560 C3orf36Q3SXR2 165 aa10.18□□□□□ -0.78
LIN54-206ENST00000506560 OR2B11Q5JQS5 317 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms