RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 MED29Q9NX70 200 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 DKKL1Q9UK85 242 aa3.52□□□□□ -1.85
HERC4-213ENST00000506515 CR1P17927 2039 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 MALRD1Q5VYJ5 2156 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 A0A0G2JMM0 328 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 A0A1W2PPB8 328 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 A0A1W2PRS3 328 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 TMEM223A0PJW6 202 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 GOLGA6L10A6NI86 522 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 SYCE1LA8MT33 242 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 ZNF705GA8MUZ8 300 aaPredicted RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 KIR3DP1A8MWS1 328 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 B4DSR2 109 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 SUPT3HB4E1H0 165 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 RTL8CO15255 209 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 RBFOX2O43251 390 aaKnown RBP eCLIP3.51□□□□□ -1.85
HERC4-213ENST00000506515 GCM2O75603 506 aaPredicted RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 FCN3O75636 299 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 TGM6O95932 706 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 IFNW1P05000 195 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 UBCP0CG48 685 aaKnown RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 EIF1P41567 113 aaKnown RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 PPICP45877 212 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 SLCO1A2P46721 670 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 FABP6P51161 128 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 RAP1GDS1P52306 607 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 PRR3P79522 188 aaKnown RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 IRF8Q02556 426 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 SLAMF1Q13291 335 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 EBPQ15125 230 aaKnown RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 TIMM23BQ5SRD1 257 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 ZNF684Q5T5D7 378 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 PAGE2Q7Z2X7 111 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 ZNF550Q7Z398 422 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 WDR86Q86TI4 376 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 CPNE9Q8IYJ1 553 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 MICU2Q8IYU8 434 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 LGI3Q8N145 548 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 MUC15Q8N387 334 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 RNF10Q8N5U6 811 aaKnown RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 OR4K17Q8NGC6 315 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 OR6Q1Q8NGQ2 317 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 C10orf105Q8TEF2 133 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 EEF1AKMT1Q8WVE0 214 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 NEURL3Q96EH8 262 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 GPR21Q99679 349 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 SUCNR1Q9BXA5 334 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 POTEKPQ9BYX7 375 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 SHCBP1LQ9BZQ2 653 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 RAB1BQ9H0U4 201 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 PIGUQ9H490 435 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 MYEF2Q9P2K5 600 aaKnown RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 SLC22A14Q9Y267 594 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 RCL1Q9Y2P8 373 aaKnown RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 CAB39Q9Y376 341 aaPredicted RBP3.51□□□□□ -1.85
HERC4-213ENST00000506515 HYOU1Q9Y4L1 999 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 KIAA1549Q9HCM3 1950 aa3.51□□□□□ -1.85
HERC4-213ENST00000506515 SVEP1Q4LDE5 3571 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 TRAV25A0A0B4J276 109 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 REM1O75628 298 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 SCELO95171 688 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 WISP3O95389 354 aaPredicted RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 ETHE1O95571 254 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 HLA-HP01893 362 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 SOD3P08294 240 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 NPY1RP25929 384 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 FKBP2P26885 142 aaKnown RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 LOXP28300 417 aaPredicted RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 IL12BP29460 328 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 SSR2P43308 183 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 CLDN18P56856 261 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 SNRPD2P62316 118 aaKnown RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 TRMT5Q32P41 509 aaKnown RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 ABCA11PQ4W5N1 156 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 KHDRBS2Q5VWX1 349 aaKnown RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 SAXO2Q658L1 398 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 STUMQ69YW2 141 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 MED27Q6P2C8 311 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 C11orf72Q8NBR9 251 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 CD200R1Q8TD46 325 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 CPNE4Q96A23 557 aaPredicted RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 PTX4Q96A99 478 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 FLYWCH2Q96CP2 140 aaKnown RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 NRBF2Q96F24 287 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 ARL5BQ96KC2 179 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 HSD17B10Q99714 261 aaKnown RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 ZNF717Q9BY31 904 aaPredicted RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 CXorf21Q9HAI6 301 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 SIRT7Q9NRC8 400 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 TSSC4Q9Y5U2 329 aaPredicted RBP3.5□□□□□ -1.85
HERC4-213ENST00000506515 ZNF780BQ9Y6R6 833 aa3.5□□□□□ -1.85
HERC4-213ENST00000506515 NUP214P35658 2090 aaPredicted RBP3.49□□□□□ -1.85
HERC4-213ENST00000506515 A0A0U1RQV1 116 aa3.49□□□□□ -1.85
HERC4-213ENST00000506515 NCF1BA6NI72 391 aaPredicted RBP3.49□□□□□ -1.85
HERC4-213ENST00000506515 NCF1CA8MVU1 366 aaPredicted RBP3.49□□□□□ -1.85
HERC4-213ENST00000506515 GABRPO00591 440 aa3.49□□□□□ -1.85
HERC4-213ENST00000506515 STK16O75716 305 aa3.49□□□□□ -1.85
HERC4-213ENST00000506515 YIF1AO95070 293 aa3.49□□□□□ -1.85
HERC4-213ENST00000506515 CD8AP01732 235 aa3.49□□□□□ -1.85
HERC4-213ENST00000506515 APCSP02743 223 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms