RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ANP32AP39687 249 aaKnown RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 RANBP1P43487 201 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 RGS6P49758 472 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 DSTNP60981 165 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 VSNL1P62760 191 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 DCDP81605 110 aaKnown RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CDK5Q00535 292 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 LOXL1Q08397 574 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 STX3Q13277 289 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 DYNC1I2Q13409 638 aaKnown RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 TAF1AQ15573 450 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 TNXAQ16473 311 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 STEAP4Q687X5 459 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CRYBG3Q68DQ2 2970 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 DEGS2Q6QHC5 323 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 OPN5Q6U736 354 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 NTM-AS1Q6ZSK4 140 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 Q6ZVH6 145 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 SAXO1Q8IYX7 474 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CYB561D1Q8N8Q1 229 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 DRAXINQ8NBI3 349 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 ST6GALNAC3Q8NDV1 305 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR1J4Q8NGS1 313 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR6N1Q8NGY5 312 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 ITLN2Q8WWU7 325 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CDS1Q92903 461 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CYYR1Q96J86 154 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 FAM19A4Q96LR4 140 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CCDC42Q96M95 316 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 Q96MT0 163 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 TBL1YQ9BQ87 522 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 SELENOSQ9BQE4 189 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 RSG1Q9BU20 258 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 GGTLC1Q9BX51 225 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 FGF23Q9GZV9 251 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 TRABDQ9H4I3 376 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF355PQ9NSJ1 428 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 EURLQ9NYK6 297 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CLEC2DQ9UHP7 191 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 C3orf18Q9UK00 162 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 PSG11Q9UQ72 335 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 ACOT9Q9Y305 439 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 FBN3Q75N90 2809 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 POLEQ07864 2286 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGLV3-16A0A075B6K0 115 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGKV1-27A0A075B6S5 117 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 GOLGA8QA0A0J9YX86 632 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 FAM240AA0A1B0GVK7 77 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A1B0GW15 77 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 SLC5A10A0PJK1 596 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMEM223A0PJW6 202 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 LIN7AO14910 233 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 PSPHP1O15172 72 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 SOCS1O15524 211 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 EIF1BO60739 113 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 NIPSNAP2O75323 286 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 CST4P01036 141 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 HLA-DQA1P01909 254 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 MT-ND4P03905 459 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 COX6B1P14854 86 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 IL1RNP18510 177 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 CD9P21926 228 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 CXCR1P25024 350 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 EIF1P41567 113 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 GALR1P47211 349 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 ERFP50548 548 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 TPM4P67936 248 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 SYCNQ0VAF6 134 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 KRT71Q3SY84 523 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 FAHD1Q6P587 224 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 EPGNQ6UW88 154 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGFL2Q6UWQ7 119 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGFL3Q6UXB1 125 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 SLC16A13Q7RTY0 426 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 SH2D6Q7Z4S9 175 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 LGI3Q8N145 548 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 RPRMLQ8N4K4 120 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 Q8N9L7 120 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 DNAAF3Q8N9W5 541 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR4K5Q8NGD3 323 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR8K1Q8NGG5 319 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR52P1PQ8NH57 321 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMEM239Q8WW34 195 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 PSMF1Q92530 271 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 TSLPQ969D9 159 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 NARS2Q96I59 477 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF488Q96MN9 340 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 FOPNLQ96NB1 174 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 RBBP8Q99708 897 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 VCXQ9H320 206 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 WDR55Q9H6Y2 383 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 NLE1Q9NVX2 485 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 RBFOX1Q9NWB1 397 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNHIT6Q9NWK9 470 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 RHBDL2Q9NX52 303 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 TAC3Q9UHF0 121 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 VAX2Q9UIW0 290 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 SLC7A11Q9UPY5 501 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 SIGLEC7Q9Y286 467 aa2.06□□□□□ -2.08
TRAPPC11-205ENST00000506426 AP3M1Q9Y2T2 418 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms