RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 GYPAP02724 150 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 UMODP07911 640 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 F2RP25116 425 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 CD82P27701 267 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 FGF8P55075 233 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-208ENST00000506368 PPP1CBP62140 327 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 GNB2P62879 340 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 PIGYQ3MUY2 71 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 C20orf196Q8IYI0 205 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 NABP1Q96AH0 204 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 RIMS4Q9H426 269 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-208ENST00000506368 PLEK2Q9NYT0 353 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 YLPM1P49750 1951 aaKnown RBP13.61□□□□□ -0.23
SCLT1-208ENST00000506368 CEP192Q8TEP8 1941 aa13.61□□□□□ -0.23
SCLT1-208ENST00000506368 IRF2P14316 349 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 CRYGSP22914 178 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 ATP6V1FQ16864 119 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 TMEM144Q7Z5S9 345 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 C17orf78Q8N4C9 275 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.6□□□□□ -0.23
SCLT1-208ENST00000506368 VSIRQ9H7M9 311 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 PARD6AQ9NPB6 346 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 KLRF1Q9NZS2 232 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 OR6C6A6NF89 314 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 FAM90A26D6RGX4 464 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 TMPRSS2O15393 492 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 SOX15O60248 233 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 LCATP04180 440 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 CLDN17P56750 224 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 RPS18P62269 152 aaKnown RBP13.6□□□□□ -0.23
SCLT1-208ENST00000506368 SAPCD1Q5SSQ6 148 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 RHBDD2Q6NTF9 364 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 CMTM2Q8TAZ6 248 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 DYRK2Q92630 601 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 TAF15Q92804 592 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCLT1-208ENST00000506368 RPUSD4Q96CM3 377 aaKnown RBP13.6□□□□□ -0.23
SCLT1-208ENST00000506368 NEIL1Q96FI4 390 aaPredicted RBP13.6□□□□□ -0.23
SCLT1-208ENST00000506368 GMPPAQ96IJ6 420 aaPredicted RBP13.6□□□□□ -0.23
SCLT1-208ENST00000506368 OR2J1Q9GZK6 312 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 PSENENQ9NZ42 101 aa13.6□□□□□ -0.23
SCLT1-208ENST00000506368 ARID1BQ8NFD5 2236 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-208ENST00000506368 ARID1AO14497 2285 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 DHHO43323 396 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 YPEL1O60688 119 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 OPN1LWP04000 364 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 YPEL3P61236 119 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-208ENST00000506368 SELENOTP62341 195 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 TMEM267Q0VDI3 215 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-208ENST00000506368 C1orf61Q13536 156 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 COTL1Q14019 142 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 FAM27BQ5VT28 67 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 SSX7Q7RTT5 188 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 GPR146Q96CH1 333 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 YPEL2Q96QA6 119 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 LRRC61Q9BV99 259 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 IGKV1-12A0A0C4DH73 117 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 MLNRO43193 412 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 PGLYRP1O75594 196 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-208ENST00000506368 MMP23AO75900 390 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 NAPSAO96009 420 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 IGKV1D-12P01611 117 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 SERPINE2P07093 398 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 IL3RAP26951 378 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 SOX8P57073 446 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 SNAI3Q3KNW1 292 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 ZNF542PQ5EBM4 170 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 NUFIP2Q7Z417 695 aaKnown RBP13.59□□□□□ -0.23
SCLT1-208ENST00000506368 ZNF295-AS1Q8N0V1 137 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 DTD1Q8TEA8 209 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 EXTL1Q92935 676 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 NAT6Q93015 286 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 WFIKKN1Q96NZ8 548 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 ELOVL1Q9BW60 279 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 OR51B6Q9H340 312 aa13.59□□□□□ -0.23
SCLT1-208ENST00000506368 IGHV1OR15-9A0A0B4J2B8 117 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 SYNGR4O95473 234 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 SERPINA7P05543 415 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 SP9P0CG40 484 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 Q6ZPA2 131 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 OR4B1Q8NGF8 309 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 VAMP8Q9BV40 100 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 GAL3ST2Q9H3Q3 398 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 ATP23Q9Y6H3 246 aa13.58□□□□□ -0.24
SCLT1-208ENST00000506368 CACNA1HO95180 2353 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 A0A1B0GX78 115 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 C2orf72A6NCS6 295 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 CD300LBA8K4G0 201 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 PDE6DO43924 150 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 OR7C1O76099 320 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-208ENST00000506368 GFERP55789 205 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 TMEM249Q2WGJ8 235 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 FBXW9Q5XUX1 488 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 KIAA0895LQ68EN5 471 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 SAXO1Q8IYX7 474 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 NEK7Q8TDX7 302 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 THOC3Q96J01 351 aaKnown RBP13.57□□□□□ -0.24
SCLT1-208ENST00000506368 TXNDC17Q9BRA2 123 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 SPAG17Q6Q759 2223 aa13.57□□□□□ -0.24
SCLT1-208ENST00000506368 A0A1W2PNR3 127 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms