RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 RAB3CQ96E17 227 aa13.44□□□□□ -0.26
SNCA-209ENST00000506244 ARHGAP5-AS1Q96IT6 56 aa13.44□□□□□ -0.26
SNCA-209ENST00000506244 OCSTAMPQ9BR26 566 aa13.44□□□□□ -0.26
SNCA-209ENST00000506244 PECRQ9BY49 303 aa13.44□□□□□ -0.26
SNCA-209ENST00000506244 AK3Q9UIJ7 227 aa13.44□□□□□ -0.26
SNCA-209ENST00000506244 DAPK2Q9UIK4 370 aa13.44□□□□□ -0.26
SNCA-209ENST00000506244 IGHV3-43A0A0B4J1X8 118 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 SMIM30A4D0T7 59 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 A6NDX4 124 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 LY6LH3BQJ8 138 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 AIREO43918 545 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 IGHV3-43DP0DP04 118 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 RAB13P51153 203 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 C11orf88Q6PI97 169 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 OR10R2Q8NGX6 335 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 CMSS1Q9BQ75 279 aaKnown RBP13.43□□□□□ -0.26
SNCA-209ENST00000506244 CENPOQ9BU64 300 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 OR2S2Q9NQN1 319 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 RNF114Q9Y508 228 aa13.43□□□□□ -0.26
SNCA-209ENST00000506244 SERPINE3A8MV23 424 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 HSD17B6O14756 317 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 TXNL1O43396 289 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 CHST1O43916 411 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 CD3GP09693 182 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 SLC2A2P11168 524 aaPredicted RBP13.42□□□□□ -0.26
SNCA-209ENST00000506244 EFNB2P52799 333 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 MXD1Q05195 221 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 ZNF816Q0VGE8 651 aaPredicted RBP13.42□□□□□ -0.26
SNCA-209ENST00000506244 UTF1Q5T230 341 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 ZNF880Q6PDB4 577 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 SLC25A48Q6ZT89 311 aaKnown RBP13.42□□□□□ -0.26
SNCA-209ENST00000506244 CROCCP3Q8IVE0 287 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 OR10V1Q8NGI7 309 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 OR2T6Q8NHC8 308 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 LINC01006Q8NI28 216 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 WFDC12Q8WWY7 111 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 TAF15Q92804 592 aaKnown RBP eCLIP13.42□□□□□ -0.26
SNCA-209ENST00000506244 YIPF6Q96EC8 236 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 ETV7Q9Y603 341 aa13.42□□□□□ -0.26
SNCA-209ENST00000506244 A0A0B4J203 849 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 GAPDHP04406 335 aaKnown RBP13.41□□□□□ -0.26
SNCA-209ENST00000506244 FAM106CPP0CH98 169 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 HIST1H1DP16402 221 aaKnown RBP13.41□□□□□ -0.26
SNCA-209ENST00000506244 TMEM50BP56557 158 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 HLA-DRB3P79483 266 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 PLAC9Q5JTB6 97 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 TMEM219Q86XT9 240 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 IL1F10Q8WWZ1 152 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 ABHD14AQ9BUJ0 271 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 ATG5Q9H1Y0 275 aa13.41□□□□□ -0.26
SNCA-209ENST00000506244 A0A1W2PPE3 182 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 A0A1W2PPI3 338 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 RAB27BO00194 218 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 TIMM23O14925 209 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 YPEL1O60688 119 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 KIR2DS4P43632 304 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 ZNF137PP52743 207 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 PLA2G7Q13093 441 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 LY6G6FQ5SQ64 297 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 ZNF439Q8NDP4 499 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 OR2AK2Q8NG84 335 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 PHF21AQ96BD5 680 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 YPEL2Q96QA6 119 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 HDHD3Q9BSH5 251 aaPredicted RBP13.4□□□□□ -0.26
SNCA-209ENST00000506244 MRPS26Q9BYN8 205 aaKnown RBP13.4□□□□□ -0.26
SNCA-209ENST00000506244 RNF167Q9H6Y7 350 aa13.4□□□□□ -0.26
SNCA-209ENST00000506244 M0QZK8 103 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 MFNGO00587 321 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 OR2F2O95006 317 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 PPP1CCP36873 323 aaKnown RBP13.39□□□□□ -0.27
SNCA-209ENST00000506244 KIR2DS1Q14954 304 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 MOGAT2Q3SYC2 334 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 MORN2Q502X0 79 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 IDNKQ5T6J7 187 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 CCBE1Q6UXH8 406 aaPredicted RBP13.39□□□□□ -0.27
SNCA-209ENST00000506244 THNSL2Q86YJ6 484 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 OR56B4Q8NH76 319 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 CYYR1Q96J86 154 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 SLC25A33Q9BSK2 321 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 PRSS22Q9GZN4 317 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 Q9N2K0 584 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 RHBDL2Q9NX52 303 aa13.39□□□□□ -0.27
SNCA-209ENST00000506244 TENM1Q9UKZ4 2725 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 A0A075B6Q4 140 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 CLEC2LP0C7M8 214 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 SMIM18P0DKX4 95 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 SNRPBP14678 240 aaKnown RBP13.38□□□□□ -0.27
SNCA-209ENST00000506244 GNB3P16520 340 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 ZBTB25P24278 435 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 TALDO1P37837 337 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 PROK1P58294 105 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 ARFRP1Q13795 201 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 GNMTQ14749 295 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 ARSJQ5FYB0 599 aaPredicted RBP13.38□□□□□ -0.27
SNCA-209ENST00000506244 TGIF2LXQ8IUE1 241 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 DRAM1Q8N682 238 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 OR52L2PQ8NGH6 319 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 OR13F1Q8NGS4 319 aa13.38□□□□□ -0.27
SNCA-209ENST00000506244 RTN4IP1Q8WWV3 396 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms