RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 C19orf54Q5BKX5 351 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 RSBN1Q5VWQ0 802 aaPredicted RBP4.58□□□□□ -1.68
GYPB-204ENST00000504951 LPCAT4Q643R3 524 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 CEMP1Q6PRD7 247 aaPredicted RBP4.58□□□□□ -1.68
GYPB-204ENST00000504951 LINC00336Q6ZUF6 198 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 FAM220AQ7Z4H9 259 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 SAXO1Q8IYX7 474 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 OR51A2Q8NGJ7 313 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 OR52M1Q8NGK5 317 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 OR8J1Q8NGP2 316 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 OR13C3Q8NGS6 347 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 OR2K2Q8NGT1 345 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 OR10K1Q8NGX5 313 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 CNIH3Q8TBE1 160 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 MRGPRDQ8TDS7 321 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 HSPB9Q9BQS6 159 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 ST6GALNAC5Q9BVH7 336 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 GABARAPL3Q9BY60 117 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 KRTAP9-3Q9BYQ3 159 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 RIBC2Q9H4K1 309 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 ZCCHC4Q9H5U6 513 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 TUBA4BQ9H853 241 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 ISG20L2Q9H9L3 353 aaKnown RBP4.58□□□□□ -1.68
GYPB-204ENST00000504951 NEK6Q9HC98 313 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 IDI2-AS1Q9NZ38 188 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 OAZ3Q9UMX2 235 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 WSB1Q9Y6I7 421 aa4.58□□□□□ -1.68
GYPB-204ENST00000504951 DAPL1A0PJW8 107 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 SHISA3A0PJX4 238 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 SAC3D1A6NKF1 404 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 NCBP2LA6PVI3 153 aaKnown RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 C15orf65H3BRN8 121 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 J3QLW9 94 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 GABRPO00591 440 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 HSD17B6O14756 317 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 SLC31A2O15432 143 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 TXNL1O43396 289 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 RGS11O94810 467 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 CDRT1O95170 752 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 HLA-DRB1P01911 266 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 LGALS1P09382 135 aaKnown RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 OCM2P0CE71 109 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 OCMP0CE72 109 aaPredicted RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 ARSBP15848 533 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 ZNF19P17023 458 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 C21orf33P30042 268 aaPredicted RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 VHLP40337 213 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 KCNJ3P48549 501 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 CCR9P51686 369 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 F2RL1P55085 397 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 ALKBH1Q13686 389 aaKnown RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 MOGAT2Q3SYC2 334 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 DNAL1Q4LDG9 190 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 ZNF691Q5VV52 312 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 STEAP3Q658P3 488 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 ELP2Q6IA86 826 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 PYHIN1Q6K0P9 492 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 MOB3BQ86TA1 216 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 LHFPL3Q86UP9 236 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 ANKRD13BQ86YJ7 626 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 RPP25LQ8N5L8 163 aaKnown RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 RGP1Q92546 391 aaPredicted RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 ARPC1AQ92747 370 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 C4orf36Q96KX1 117 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 RHOVQ96L33 236 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 PDCD1LG2Q9BQ51 273 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 KLK5Q9Y337 293 aaPredicted RBP4.57□□□□□ -1.68
GYPB-204ENST00000504951 AP4S1Q9Y587 144 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 CEPT1Q9Y6K0 416 aa4.57□□□□□ -1.68
GYPB-204ENST00000504951 PKHD1P08F94 4074 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 IGHV3-43A0A0B4J1X8 118 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 A0A1W2PP11 408 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 SULT1B1O43704 296 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 BRI3O95415 125 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 HTR1AP08908 422 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 IGHV3-43DP0DP04 118 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 GZMHP20718 246 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 ZP3P21754 424 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 FASP25445 335 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 GTF2A1P52655 376 aaPredicted RBP4.56□□□□□ -1.68
GYPB-204ENST00000504951 ZNF134P52741 427 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 SLURP1P55000 103 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 TCTAP57738 103 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 TNFRSF9Q07011 255 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 TMED1Q13445 227 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 KLF5Q13887 457 aaPredicted RBP4.56□□□□□ -1.68
GYPB-204ENST00000504951 ZIK1Q3SY52 487 aaPredicted RBP4.56□□□□□ -1.68
GYPB-204ENST00000504951 ZNF660Q6AZW8 331 aaPredicted RBP4.56□□□□□ -1.68
GYPB-204ENST00000504951 XAF1Q6GPH4 301 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 ZNF529Q6P280 563 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 CD200R1LQ6Q8B3 271 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 ASCL4Q6XD76 172 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 IL34Q6ZMJ4 242 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 KCTD20Q7Z5Y7 419 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 C5orf24Q7Z6I8 188 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 GTSCR1Q86UQ5 136 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 Q8N402 240 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 PARP16Q8N5Y8 322 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 ACBD7Q8N6N7 88 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 SUMF2Q8NBJ7 301 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms