RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ZFAND3Q9H8U3 227 aa9.26□□□□□ -0.93
LSM6-204ENST00000504181 SPAG4Q9NPE6 437 aa9.26□□□□□ -0.93
LSM6-204ENST00000504181 H3BN98 237 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 UBE2CO00762 179 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 RRHO14718 337 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 RPP14O95059 124 aaKnown RBP9.25□□□□□ -0.93
LSM6-204ENST00000504181 ATF1P18846 271 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 GZMHP20718 246 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 PRKACBP22694 351 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 SLC2A5P22732 501 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 MFAP2P55001 183 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 CXCR4P61073 352 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 ZNF343Q6P1L6 599 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 PP6455Q8WZ26 134 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 ADAT3Q96EY9 351 aaPredicted RBP9.25□□□□□ -0.93
LSM6-204ENST00000504181 OPALINQ96PE5 141 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 TMEM14AQ9Y6G1 99 aa9.25□□□□□ -0.93
LSM6-204ENST00000504181 DNAH5Q8TE73 4624 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 A0A0B4J203 849 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 INAFM2P0DMQ5 153 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 FCGR2BP31994 310 aaPredicted RBP9.24□□□□□ -0.93
LSM6-204ENST00000504181 PAX5Q02548 391 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 Q3ZCU0 254 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 TM4SF20Q53R12 229 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 ZNF322Q6U7Q0 402 aaPredicted RBP9.24□□□□□ -0.93
LSM6-204ENST00000504181 STPG3Q8N7X2 389 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 CCDC107Q8WV48 283 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 DYDC1Q8WWB3 177 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 ADI1Q9BV57 179 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 RHOFQ9HBH0 211 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 GNG12Q9UBI6 72 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 NACAE9PAV3 2078 aa9.24□□□□□ -0.93
LSM6-204ENST00000504181 C2orf70A6NJV1 201 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 H3BUA1 57 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 KRT36O76013 467 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 SCAF4O95104 1147 aaKnown RBP9.23□□□□□ -0.93
LSM6-204ENST00000504181 OCM2P0CE71 109 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 OCMP0CE72 109 aaPredicted RBP9.23□□□□□ -0.93
LSM6-204ENST00000504181 FOLR2P14207 255 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 AADACP22760 399 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 HMGA2P52926 109 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 LGALS9BQ3B8N2 356 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 WDR93Q6P2C0 686 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 TMEM61Q8N0U2 210 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 POM121L12Q8N7R1 296 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 GRPEL2Q8TAA5 225 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 CACNG8Q8WXS5 425 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 SNAPC3Q92966 411 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 SAR1AQ9NR31 198 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 TECRQ9NZ01 308 aaKnown RBP9.23□□□□□ -0.93
LSM6-204ENST00000504181 ZNF581Q9P0T4 197 aa9.23□□□□□ -0.93
LSM6-204ENST00000504181 IGHV4-4A0A075B6R2 117 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 LOC107986453A0A1B0GWG9 222 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 BMPR1BO00238 502 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 GMNNO75496 209 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 CA2P00918 260 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 KCNJ3P48549 501 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 ACTR3P61158 418 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 MICAQ29983 383 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 LCE2CQ5TA81 110 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 SAXO1Q8IYX7 474 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 C10orf35Q96D05 121 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 NIPSNAP1Q9BPW8 284 aa9.22□□□□□ -0.93
LSM6-204ENST00000504181 HOPXQ9BPY8 73 aaPredicted RBP9.22□□□□□ -0.93
LSM6-204ENST00000504181 IGLV2-18A0A075B6J9 118 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 TMEM30CPA0ZSE6 113 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 CCDC182A6NF36 153 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 DEFB4AO15263 64 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 TMEM225BP0DP42 221 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 RPL35AP18077 110 aaKnown RBP9.21□□□□□ -0.94
LSM6-204ENST00000504181 GINS1Q14691 196 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 C8orf82Q6P1X6 216 aaPredicted RBP9.21□□□□□ -0.94
LSM6-204ENST00000504181 FAM131AQ6UXB0 335 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 UTS2BQ765I0 119 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 KCTD20Q7Z5Y7 419 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 PRR18Q8N4B5 295 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 SUMF2Q8NBJ7 301 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 SPSB1Q96BD6 273 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 FGGYQ96C11 551 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 CNN2Q99439 309 aaKnown RBP9.21□□□□□ -0.94
LSM6-204ENST00000504181 DPCDQ9BVM2 203 aaPredicted RBP9.21□□□□□ -0.94
LSM6-204ENST00000504181 C11orf68Q9H3H3 251 aaKnown RBP9.21□□□□□ -0.94
LSM6-204ENST00000504181 MRGBPQ9NV56 204 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 UBQLN2Q9UHD9 624 aa9.21□□□□□ -0.94
LSM6-204ENST00000504181 V9GYY5 206 aaPredicted RBP9.21□□□□□ -0.94
LSM6-204ENST00000504181 FLG2Q5D862 2391 aaPredicted RBP9.21□□□□□ -0.94
LSM6-204ENST00000504181 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 C11orf94C9JXX5 98 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 ORC5O43913 435 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 ZNF20P17024 532 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 RPS16P62249 146 aaKnown RBP9.2□□□□□ -0.94
LSM6-204ENST00000504181 ZSCAN26Q16670 478 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 ANKRD55Q3KP44 614 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 PIGYQ3MUY2 71 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 SOHLH1Q5JUK2 328 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 ZNF57Q68EA5 555 aaPredicted RBP9.2□□□□□ -0.94
LSM6-204ENST00000504181 ZNF562Q6V9R5 426 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 ODF3L1Q8IXM7 274 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 CCDC54Q8NEL0 328 aa9.2□□□□□ -0.94
LSM6-204ENST00000504181 OR10AC1Q8NH08 325 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms