RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 BEND2Q8NDZ0 799 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 OR52M1Q8NGK5 317 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 JMJD8Q96S16 334 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 MMP28Q9H239 520 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.35□□□□□ -0.276e-6■■■■□ 22.2
SCLT1-205ENST00000503401 DIABLOQ9NR28 239 aa13.35□□□□□ -0.27
SCLT1-205ENST00000503401 COL6A5A8TX70 2615 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 BUB1B-PAK6H3BSN5 160 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 ZNF701M0R085 212 aaPredicted RBP13.34□□□□□ -0.27
SCLT1-205ENST00000503401 GSTP1P09211 210 aaKnown RBP13.34□□□□□ -0.27
SCLT1-205ENST00000503401 PPP1CCP36873 323 aaKnown RBP13.34□□□□□ -0.27
SCLT1-205ENST00000503401 TALDO1P37837 337 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 IER3P46695 156 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 UBA52P62987 128 aaKnown RBP13.34□□□□□ -0.27
SCLT1-205ENST00000503401 MADCAM1Q13477 382 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 ZNF554Q86TJ5 538 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 LDLRAD3Q86YD5 345 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 DYNC2LI1Q8TCX1 351 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 ACOT12Q8WYK0 555 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 GALMQ96C23 342 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 S100A16Q96FQ6 103 aaKnown RBP13.34□□□□□ -0.27
SCLT1-205ENST00000503401 RAB9BQ9NP90 201 aa13.34□□□□□ -0.27
SCLT1-205ENST00000503401 RAB13P51153 203 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 ZNF134P52741 427 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 GNG2P59768 71 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 ARL6IP1Q15041 203 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 KRTAP24-1Q3LI83 254 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 MINOS1Q5TGZ0 78 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 OR10X1Q8NGY0 326 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 SSMEM1Q8WWF3 244 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 AP3S1Q92572 193 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 DGCR14Q96DF8 476 aaKnown RBP13.33□□□□□ -0.28
SCLT1-205ENST00000503401 MALSU1Q96EH3 234 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 SSX3Q99909 188 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 MEGF9Q9H1U4 602 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 DPM3Q9P2X0 92 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 MINOS1-NBL1R4GNA1 71 aa13.33□□□□□ -0.28
SCLT1-205ENST00000503401 IGKV1D-8A0A087WSZ0 117 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 A0A0A6YYH2 397 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 A6NJ64 397 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 H3BUX3 64 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 XRCC3O43542 346 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 SSX5O60225 188 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 ELK1P19419 428 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 SOX6P35712 828 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 HTD2P86397 168 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 DIAPH2-AS1Q14236 149 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 MORN2Q502X0 79 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 TMEM69Q5SWH9 247 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 ZNF439Q8NDP4 499 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 TAF15Q92804 592 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCLT1-205ENST00000503401 GCDHQ92947 438 aaPredicted RBP13.32□□□□□ -0.28
SCLT1-205ENST00000503401 ST6GALNAC5Q9BVH7 336 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 CHIAQ9BZP6 476 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 OR1A1Q9P1Q5 309 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 SLC23A1Q9UHI7 598 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 JPT1Q9UK76 154 aa13.32□□□□□ -0.28
SCLT1-205ENST00000503401 IGKV1-6A0A0C4DH72 117 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 LEUTXA8MZ59 168 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 TRDCB7Z8K6 153 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 GSTT2P0CG29 244 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 GSTT2BP0CG30 244 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 HERPUD1Q15011 391 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 CT45A1Q5HYN5 189 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 MZT2AQ6P582 158 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 CT45A3Q8NHU0 189 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 PARP12Q9H0J9 701 aaKnown RBP13.31□□□□□ -0.28
SCLT1-205ENST00000503401 AUNIPQ9H7T9 357 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 MGAT4AQ9UM21 535 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 LY6LH3BQJ8 138 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 FABP7O15540 132 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 APOA1P02647 267 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 FCER2P06734 321 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 TAS2R20P59543 309 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 LY6EQ16553 131 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 PNLIPRP3Q17RR3 467 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 LRRC75BQ2VPJ9 315 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 TMEM30BQ3MIR4 351 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 IGSF11Q5DX21 431 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 TPTE2P1Q5T6R2 138 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 DPAGT1Q9H3H5 408 aa13.31□□□□□ -0.28
SCLT1-205ENST00000503401 CCDC59Q9P031 241 aaKnown RBP13.31□□□□□ -0.28
SCLT1-205ENST00000503401 RSL24D1Q9UHA3 163 aaKnown RBP13.31□□□□□ -0.28
SCLT1-205ENST00000503401 MEIS3P1A6NDR6 274 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 CLDN34H7C241 214 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 HSPA12AO43301 675 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 RNASE1P07998 156 aaKnown RBP13.3□□□□□ -0.28
SCLT1-205ENST00000503401 DTYMKP23919 212 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 MNDAP41218 407 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 REG1BP48304 166 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 SLC25A48Q6ZT89 311 aaKnown RBP13.3□□□□□ -0.28
SCLT1-205ENST00000503401 GVQW1Q8N7I0 195 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
SCLT1-205ENST00000503401 PIFOQ8TCI5 191 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 RPEQ96AT9 228 aa13.3□□□□□ -0.28
SCLT1-205ENST00000503401 DCUN1D5Q9BTE7 237 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms