RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 TRAPPC6AO75865 159 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 HLA-HP01893 362 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 CFIP05156 583 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 FOXG1P55316 489 aaPredicted RBP6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 COA6Q5JTJ3 125 aaKnown RBP6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 KRBOX4Q5JUW0 171 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 ZNF610Q8N9Z0 462 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 NANPQ8TBE9 248 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 CD300LFQ8TDQ1 290 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 RFNGQ9Y644 331 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 SEC14L6B5MCN3 397 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 NGFP01138 241 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 CXCL1P09341 107 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 DAOP14920 347 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 SELEP16581 610 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 ERVFRD-1P60508 538 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 UBE2KP61086 200 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 HBG1P69891 147 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 HBG2P69892 147 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 PLP2Q04941 152 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 TCEAL6Q6IPX3 200 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 ZNF645Q8N7E2 425 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 THOC3Q96J01 351 aaKnown RBP6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 SSX3Q99909 188 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 VAX2Q9UIW0 290 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 KLF13Q9Y2Y9 288 aaPredicted RBP6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 SDK2Q58EX2 2172 aa6.1□□□□□ -1.43
LYSMD3-203ENST00000500869 PATE3B3GLJ2 98 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 RUNX1Q01196 453 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 ARL16Q0P5N6 197 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 TGIF1Q15583 401 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 OR1C1Q15619 314 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 SLC35E4Q6ICL7 350 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 SUMF1Q8NBK3 374 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 MAGT1Q9H0U3 335 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 LINC00587B1AMM8 73 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 TMEM250H0YL14 139 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 GATCO43716 136 aaKnown RBP6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 SMPD2O60906 423 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 LILRA1O75019 489 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 CST7O76096 145 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 CELA3AP09093 270 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 RAC2P15153 192 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 MPLP40238 635 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 ZXDAP98168 799 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 FBXW9Q5XUX1 488 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 WDR25Q64LD2 544 aaPredicted RBP6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 CYP2G1PQ6ZSU1 146 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 TGIF2LYQ8IUE0 185 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 EDARADDQ8WWZ3 215 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 WDYHV1Q96HA8 205 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 C20orf24Q9BUV8 137 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 ZDHHC11Q9H8X9 412 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 CHODLQ9H9P2 273 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 RPRMQ9NS64 109 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 OR1A1Q9P1Q5 309 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 A0A1W2PR80 420 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 WRBO00258 174 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 IFNA1P01562 189 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 OPN1MWP04001 364 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 SERPINE2P07093 398 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 OPN1MW2P0DN77 364 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 OPN1MW3P0DN78 364 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 ASCL1P50553 236 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 SPINK14Q6IE38 97 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 SLC16A13Q7RTY0 426 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 C5orf24Q7Z6I8 188 aa6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 ERRFI1Q9UJM3 462 aaPredicted RBP6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 PUS1Q9Y606 427 aaKnown RBP eCLIP6.09□□□□□ -1.43
LYSMD3-203ENST00000500869 LAMA1P25391 3075 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 A0A1W2PNU3 283 aaPredicted RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BKO60814 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 OR2H2O95918 312 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BJP06899 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 SP1P08047 785 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 GLI4P10075 376 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BOP23527 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BBP33778 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 MAGEA5P43359 124 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BDP58876 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BCP62807 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST2H2BEQ16778 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 DCAF10Q5QP82 559 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 ABHD17BQ5VST6 288 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 ZNF787Q6DD87 383 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 SSX7Q7RTT5 188 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST3H2BBQ8N257 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 DRAM1Q8N682 238 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BHQ93079 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BNQ99877 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 HIST1H2BMQ99879 126 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 PSENENQ9NZ42 101 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 KCNIP1Q9NZI2 227 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 CACNG5Q9UF02 275 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 TINAGQ9UJW2 476 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 PCP4L1A6NKN8 68 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 RAB29O14966 203 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 LAMTOR5O43504 91 aa6.08□□□□□ -1.44
LYSMD3-203ENST00000500869 MBP02144 154 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms