RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 SPNP16150 400 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 MYL12AP19105 171 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 GZMHP20718 246 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 CRHBPP24387 322 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 ZNF134P52741 427 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 RUNX1Q01196 453 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 GALEQ14376 348 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 FAM27D1Q5T7N8 215 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 ZNF529Q6P280 563 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 ASCL4Q6XD76 172 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 LHFPL3Q86UP9 236 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 ZNF429Q86V71 674 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 ZNF439Q8NDP4 499 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 OR8H1Q8NGG4 311 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 TSEN15Q8WW01 171 aaKnown RBP12.45□□□□□ -0.42
MUC1-220ENST00000498431 ALX4Q9H161 411 aaPredicted RBP12.45□□□□□ -0.42
MUC1-220ENST00000498431 CHCHD3Q9NX63 227 aaKnown RBP12.45□□□□□ -0.42
MUC1-220ENST00000498431 ERVK13-1Q9NX77 482 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 ZNF107Q9UII5 783 aaPredicted RBP12.45□□□□□ -0.42
MUC1-220ENST00000498431 ZNF580Q9UK33 172 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 DHDHQ9UQ10 334 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 ST3GAL6Q9Y274 331 aa12.45□□□□□ -0.42
MUC1-220ENST00000498431 OVOL1O14753 267 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 GEMIN2O14893 280 aaKnown RBP12.44□□□□□ -0.42
MUC1-220ENST00000498431 SAP30O75446 220 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 CDK1P06493 297 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 RAB3AP20336 220 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 IL3RAP26951 378 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 RBM11P57052 281 aaKnown RBP12.44□□□□□ -0.42
MUC1-220ENST00000498431 SLC25A48Q6ZT89 311 aaKnown RBP12.44□□□□□ -0.42
MUC1-220ENST00000498431 RGP1Q92546 391 aaPredicted RBP12.44□□□□□ -0.42
MUC1-220ENST00000498431 DLX4Q92988 240 aaPredicted RBP12.44□□□□□ -0.42
MUC1-220ENST00000498431 CITED4Q96RK1 184 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 ALG8Q9BVK2 526 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 DUSP21Q9H596 190 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 IFT22Q9H7X7 185 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 TAS2R4Q9NYW5 299 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 VSIG4Q9Y279 399 aa12.44□□□□□ -0.42
MUC1-220ENST00000498431 ATP6V0E1O15342 81 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 IGLV1-40P01703 118 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 GP9P14770 177 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 CNTFRP26992 372 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 SOX2P48431 317 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 ETV1P50549 477 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 ZNF137PP52743 207 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 SLURP1P55000 103 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 TMEM65Q6PI78 240 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 OR10V1Q8NGI7 309 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 OR5AK2Q8NH90 309 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 RITA1Q96K30 269 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 ZMAT4Q9H898 229 aa12.43□□□□□ -0.42
MUC1-220ENST00000498431 PAK1IP1Q9NWT1 392 aaPredicted RBP12.43□□□□□ -0.42
MUC1-220ENST00000498431 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
MUC1-220ENST00000498431 A0A1W2PP11 408 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 TMEM212A6NML5 194 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 C12orf77C9JDV5 145 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 RGS10O43665 173 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 ORC5O43913 435 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 MT-ND4P03905 459 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 OR5H8P0DN80 308 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 GABARAPL2P60520 117 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 LSAMPQ13449 338 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 MMDQ15546 238 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 NHLRC3Q5JS37 347 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 ATAD3CQ5T2N8 411 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 ADAMTSL5Q6ZMM2 481 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 TMPRSS11AQ6ZMR5 421 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 SYS1Q8N2H4 156 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 OR52N1Q8NH53 320 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 CPNE2Q96FN4 548 aaPredicted RBP12.42□□□□□ -0.42
MUC1-220ENST00000498431 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 ING4Q9UNL4 249 aa12.42□□□□□ -0.42
MUC1-220ENST00000498431 FAM90A10PA6NDY2 464 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 AIPO00170 330 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 MAGEB3O15480 346 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 TXNL1O43396 289 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 MRPS14O60783 128 aaKnown RBP12.41□□□□□ -0.42
MUC1-220ENST00000498431 RAB9AP51151 201 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 DOC2BQ14184 412 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 Q3ZCU0 254 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 RNLSQ5VYX0 342 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 PRSS48Q7RTY5 328 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 OR1L1Q8NH94 360 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 NEK7Q8TDX7 302 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 CASTOR1Q8WTX7 329 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 CYYR1Q96J86 154 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 TM2D3Q9BRN9 247 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 CHCHD6Q9BRQ6 235 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 CCDC90BQ9GZT6 254 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 OR51J1Q9H342 316 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 IL36GQ9NZH8 169 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 CLEC2DQ9UHP7 191 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 ERGIC3Q9Y282 383 aa12.41□□□□□ -0.42
MUC1-220ENST00000498431 IGHV7-81A0A0B4J1V7 117 aa12.4□□□□□ -0.42
MUC1-220ENST00000498431 MAGEA13PA6NCF6 341 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms