RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 CRYM-AS1A6NIL9 109 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 C17orf100A8MU93 164 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 ZNF205O95201 554 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 RCC1P18754 421 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-208ENST00000497637 SERPINF1P36955 418 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 OR3A1P47881 315 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 FXYD4P59646 89 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 PAX5Q02548 391 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 HMGN3Q15651 99 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 TMEM249Q2WGJ8 235 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 Q5BKY6 102 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 C5orf24Q7Z6I8 188 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 SGPP2Q8IWX5 399 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 C9orf62Q8N4C0 152 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 OR11L1Q8NGX0 322 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 WDR89Q96FK6 387 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-208ENST00000497637 GCM1Q9NP62 436 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 TRAPPC2LQ9UL33 140 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 BOLA1Q9Y3E2 137 aa16.46■□□□□ 0.23
ACTN4-208ENST00000497637 TRBV6-7A0A0A0MS04 114 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 BET1O15155 118 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 SNAPC5O75971 98 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 HOXA4Q00056 320 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-208ENST00000497637 ATXN7L3Q14CW9 347 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-208ENST00000497637 SLC9A3R2Q15599 337 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 ABCA11PQ4W5N1 156 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 H1FOOQ8IZA3 346 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-208ENST00000497637 LILRB1Q8NHL6 650 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-208ENST00000497637 PPP1R35Q8TAP8 253 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 TOMM40LQ969M1 308 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 DNAJB11Q9UBS4 358 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 METRNQ9UJH8 293 aa16.45■□□□□ 0.22
ACTN4-208ENST00000497637 ZNF737O75373 536 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 TNFRSF1AP19438 455 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 APOBEC3AP31941 199 aaPredicted RBP16.44■□□□□ 0.22
ACTN4-208ENST00000497637 PIGPP57054 158 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 IFITM2Q01629 132 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 EFNB3Q15768 340 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 ANKRD55Q3KP44 614 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 FAM209AQ5JX71 171 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 C12orf54Q6X4T0 127 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 KCTD9Q7L273 389 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 FAM185AQ8N0U4 392 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 BOLLQ8N9W6 283 aaKnown RBP16.44■□□□□ 0.22
ACTN4-208ENST00000497637 CCDC71LQ8N9Z2 235 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 OR5T2Q8NGG2 359 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 SGMS2Q8NHU3 365 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 COQ2Q96H96 371 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 SNX22Q96L94 193 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 NAA60Q9H7X0 242 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 RAB18Q9NP72 206 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 PLSCR3Q9NRY6 295 aa16.44■□□□□ 0.22
ACTN4-208ENST00000497637 IGKV1D-17A0A075B6S4 117 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 TEX13DA0A0J9YY54 714 aaPredicted RBP16.43■□□□□ 0.22
ACTN4-208ENST00000497637 M0R233 179 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 CD8AP01732 235 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 RND3P61587 244 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 SRSF2Q01130 221 aaKnown RBP16.43■□□□□ 0.22
ACTN4-208ENST00000497637 GALNT14Q96FL9 552 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 KCNIP1Q9NZI2 227 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 KCNIP3Q9Y2W7 256 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 RNF115Q9Y4L5 304 aa16.43■□□□□ 0.22
ACTN4-208ENST00000497637 TRAV39A0A0B4J263 110 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 PLAUP00749 431 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 IGHV4-39P01824 125 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 TFF1P04155 84 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 RBMXP38159 391 aaKnown RBP16.42■□□□□ 0.22
ACTN4-208ENST00000497637 DSCR9P59020 149 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 CYB5R2Q6BCY4 276 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 ZNF565Q8N9K5 539 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 OR10J5Q8NHC4 309 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 ANGPTL6Q8NI99 470 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 RTN4IP1Q8WWV3 396 aaPredicted RBP16.42■□□□□ 0.22
ACTN4-208ENST00000497637 NEUROG1Q92886 237 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 EGLN1Q9GZT9 426 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 SLC5A7Q9GZV3 580 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 TAF9BQ9HBM6 251 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 KIF25Q9UIL4 384 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 HSPB11Q9Y547 144 aa16.42■□□□□ 0.22
ACTN4-208ENST00000497637 IGHV3OR15-7A0A075B7D8 119 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 OOEPA6NGQ2 149 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 B9A039 149 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 GPR31O00270 319 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 GNRHRP30968 328 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 CD80P33681 288 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 AESQ08117 197 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 LOXL1Q08397 574 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-208ENST00000497637 MST1LQ2TV78 715 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 KRBOX4Q5JUW0 171 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 C6orf183Q5T699 404 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 GSG1LQ6UXU4 331 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 ASCC1Q8N9N2 400 aaKnown RBP16.41■□□□□ 0.22
ACTN4-208ENST00000497637 KIRREL1Q96J84 757 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 TMEM246Q9BRR3 403 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 SUCNR1Q9BXA5 334 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 GON7Q9BXV9 100 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 NCOR1P1Q9H4R4 102 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 SLC2A9Q9NRM0 540 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 PPP1R3CQ9UQK1 317 aa16.41■□□□□ 0.22
ACTN4-208ENST00000497637 OR2W1Q9Y3N9 320 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms