RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 NXPH3O95157 252 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 IGLV2-14P01704 120 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 CECR9P0C854 216 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 KITLGP21583 273 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 PPT1P50897 306 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 DYNLT3P51808 116 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 MZT1Q08AG7 82 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 P2RY6Q15077 328 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 CBLN2Q8IUK8 224 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 FAM213BQ8TBF2 198 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 TMEM171Q8WVE6 324 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 GALMQ96C23 342 aa9.35□□□□□ -0.91
CMSS1-208ENST00000496116 CACNA1GO43497 2377 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 OOEPA6NGQ2 149 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 A6NLC8 198 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 K7N7A8 449 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 CEACAM4O75871 244 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 C1QL1O75973 258 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 DFFBO76075 338 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 WISP2O76076 250 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 CST7O76096 145 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 EIF2S3P41091 472 aaKnown RBP9.34□□□□□ -0.91
CMSS1-208ENST00000496116 FOXF2Q12947 444 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 SLC35E4Q6ICL7 350 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 CXorf67Q86X51 503 aaPredicted RBP9.34□□□□□ -0.91
CMSS1-208ENST00000496116 TMEM217Q8N7C4 229 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 ZBTB34Q8NCN2 500 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 ATP5SQ99766 215 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 WSB1Q9Y6I7 421 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 OTOGLQ3ZCN5 2332 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 A0A0G2JRQ6 117 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 C9JQL5 133 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 PSPNO60542 156 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 TSPAN9O75954 239 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 TMEM50AO95807 157 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 IGLV1-44P01699 117 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 IL2RGP31785 369 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 SULT1A1P50225 295 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 MBNL2Q5VZF2 373 aaKnown RBP9.34□□□□□ -0.91
CMSS1-208ENST00000496116 ACP7Q6ZNF0 438 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 BEND4Q6ZU67 534 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 NINJ1Q92982 152 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 CACNG5Q9UF02 275 aa9.34□□□□□ -0.91
CMSS1-208ENST00000496116 C1QTNF9BB2RNN3 333 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 TNFSF13O75888 250 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 CEBPDP49716 269 aaPredicted RBP9.33□□□□□ -0.92
CMSS1-208ENST00000496116 FABP6P51161 128 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 PAX9P55771 341 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 FLI1Q01543 452 aaPredicted RBP9.33□□□□□ -0.92
CMSS1-208ENST00000496116 SMIM21Q3B7S5 101 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF826PQ6ZT77 177 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 BHLHA15Q7RTS1 189 aaPredicted RBP9.33□□□□□ -0.92
CMSS1-208ENST00000496116 C11orf53Q8IXP5 236 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF645Q8N7E2 425 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF610Q8N9Z0 462 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 UBALD1Q8TB05 177 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 PRR7Q8TB68 274 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 STARD4Q96DR4 205 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 SMDT1Q9H4I9 107 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 ZNF71Q9NQZ8 489 aaPredicted RBP9.33□□□□□ -0.92
CMSS1-208ENST00000496116 PRELID1Q9Y255 219 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 PTPRBP23467 1997 aa9.33□□□□□ -0.92
CMSS1-208ENST00000496116 IGHV2OR16-5A0A0B4J2B6 119 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 A0A1B0GW64 132 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 MBD3L4A6NDZ8 208 aaPredicted RBP9.32□□□□□ -0.92
CMSS1-208ENST00000496116 BTBD17A6NE02 478 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 MBD3L3A6NE82 208 aaPredicted RBP9.32□□□□□ -0.92
CMSS1-208ENST00000496116 MBD3L5A6NJ08 208 aaPredicted RBP9.32□□□□□ -0.92
CMSS1-208ENST00000496116 OR5H1A6NKK0 313 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 IFNL4K9M1U5 179 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 TXNL1O43396 289 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 SYNGR2O43760 224 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 IFNA5P01569 189 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 IGKV1-39P01597 117 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 IGKV1D-39P04432 117 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 OR3A1P47881 315 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 HFEQ30201 348 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 SLC25A24Q6NUK1 477 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 WDR82Q6UXN9 313 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 ODF3L1Q8IXM7 274 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 DRAM1Q8N682 238 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 FAM169BQ8N8A8 192 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 OR10Z1Q8NGY1 313 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 MBD3L2Q8NHZ7 208 aaPredicted RBP9.32□□□□□ -0.92
CMSS1-208ENST00000496116 TAAR6Q96RI8 345 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 OPN3Q9H1Y3 402 aaPredicted RBP9.32□□□□□ -0.92
CMSS1-208ENST00000496116 DKK4Q9UBT3 224 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 MLXQ9UH92 298 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 IGHV1-18A0A0C4DH31 117 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 KIAA1324LA8MWY0 1029 aaPredicted RBP9.32□□□□□ -0.92
CMSS1-208ENST00000496116 WNT9BO14905 357 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 CGAP01215 116 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 CEACAM1P13688 526 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 GABRA2P47869 451 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 AESQ08117 197 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 AKR1C8PQ5T2L2 129 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 PRAMEF6Q5VXH4 476 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 DPPA3Q6W0C5 159 aa9.32□□□□□ -0.92
CMSS1-208ENST00000496116 KDF1Q8NAX2 398 aaPredicted RBP9.32□□□□□ -0.92
CMSS1-208ENST00000496116 SLC35B3Q9H1N7 401 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms