RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	TRAV38-1	A0A0B4J264	116 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	PPIAL4D	F5H284	164 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	C15orf65	H3BRN8	121 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	SIGLEC5	O15389	551 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	HOXB5	P09067	269 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	PPIAL4F	P0DN26	164 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	LUM	P51884	338 aa	Predicted RBP	13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	EDDM3B	P56851	147 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	CR1L	Q2VPA4	569 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	TRAT1	Q6PIZ9	186 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	TBC1D26	Q86UD7	250 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	FAM216B	Q8N7L0	139 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	TP53RK	Q96S44	253 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	GPHA2	Q96T91	129 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	PPIAL4A	Q9Y536	164 aa		13.63	□□□□□ -0.23
HLA-A-208	ENST00000496081	IGHV1-69-2	A0A0G2JMI3	117 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	C3orf85	A0A1B0GTC6	90 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	PHF1	O43189	567 aa	Predicted RBP	13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	IGLV2-14	P01704	120 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	GZMH	P20718	246 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	LIAT1	Q6ZQX7	453 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	CMTM1	Q8IZ96	169 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	BVES	Q8NE79	360 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	RFESD	Q8TAC1	157 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	PPP1R1C	Q8WVI7	109 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	MSI2	Q96DH6	328 aa	Known RBP	13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR10C1	Q96KK4	312 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	VRK1	Q99986	396 aa	Predicted RBP	13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	TOLLIP	Q9H0E2	274 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	FAM234A	Q9H0X4	552 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	NCOR1P1	Q9H4R4	102 aa		13.62	□□□□□ -0.23
HLA-A-208	ENST00000496081	C19orf84	I3L1E1	186 aa		13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	PGLYRP1	O75594	196 aa	Predicted RBP	13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	FGL1	Q08830	312 aa		13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	GNMT	Q14749	295 aa		13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	LRTM2	Q8N967	370 aa		13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	NMES1	Q9C002	83 aa		13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	ZNF462	Q96JM2	2506 aa		13.61	□□□□□ -0.23
HLA-A-208	ENST00000496081	FXYD6-FXYD2	A0A087WZ82	144 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	TMPRSS2	O15393	492 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	SPINT2	O43291	252 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR8U9	P0C7N5	309 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	PPOX	P50336	477 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	CYCS	P99999	105 aa	Known RBP	13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	LRRC37A5P	Q49AS3	106 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR8U1	Q8NH10	309 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	C14orf79	Q96F83	325 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	TMEM222	Q9H0R3	208 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR2S2	Q9NQN1	319 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	COMMD9	Q9P000	198 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	RBM7	Q9Y580	266 aa	Known RBP	13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	DSCAML1	Q8TD84	2053 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	NKX6-3	A6NJ46	265 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	HMSD	A8MTL9	139 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	TNFRSF13B	O14836	293 aa	Predicted RBP	13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	TNFSF12	O43508	249 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	CGB3	P0DN86	165 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	CGB7	P0DN87	165 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	CXCL2	P19875	107 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	PPP1CC	P36873	323 aa	Known RBP	13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	HTD2	P86397	168 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	LHFPL5	Q8TAF8	219 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	NINJ1	Q92982	152 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	C18orf12	Q96KH6	178 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	OR6C3	Q9NZP0	311 aa		13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	FBXO9	Q9UK97	447 aa	Predicted RBP	13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	PAIP2B	Q9ULR5	123 aa	Known RBP	13.6	□□□□□ -0.23
HLA-A-208	ENST00000496081	IGHV3-43	A0A0B4J1X8	118 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	ARPC5	O15511	151 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	IGHV3-43D	P0DP04	118 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	SSTR2	P30874	369 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	GGNBP1	Q5YKI7	109 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	LYZL2	Q7Z4W2	148 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	LGI3	Q8N145	548 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	FGFRL1	Q8N441	504 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	AKR1E2	Q96JD6	320 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	C2orf50	Q96LR7	162 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	CBLN4	Q9NTU7	201 aa		13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.59	□□□□□ -0.23
HLA-A-208	ENST00000496081		A0A1W2PPR1	153 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	IGFBP2	P18065	325 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	F2R	P25116	425 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	S100G	P29377	79 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	IL15RA	Q13261	267 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	HFE	Q30201	348 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	C11orf71	Q6IPW1	123 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	C11orf87	Q6NUJ2	197 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	GON7	Q9BXV9	100 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	SLA2	Q9H6Q3	261 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	CALY	Q9NYX4	217 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	KCNS2	Q9ULS6	477 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	LRBA	P50851	2863 aa		13.58	□□□□□ -0.23
HLA-A-208	ENST00000496081	RGS13	O14921	159 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	MPC2	O95563	127 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	IFNA21	P01568	189 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	SOD3	P08294	240 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	SLC25A4	P12235	298 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	PSMB6	P28072	239 aa		13.58	□□□□□ -0.24

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