RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 NKX2-1P43699 371 aaPredicted RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 TDGF1P3P51864 188 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 RIPPLY3P57055 190 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 MSMO1Q15800 293 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 BEX5Q5H9J7 111 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 KRBOX4Q5JUW0 171 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 GPR157Q5UAW9 335 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 PRAMEF6Q5VXH4 476 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 ZNF324BQ6AW86 544 aaPredicted RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 VHLLQ6RSH7 139 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 ZNF474Q6S9Z5 364 aaPredicted RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 WDR82Q6UXN9 313 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 WDR86Q86TI4 376 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 FOXRED2Q8IWF2 684 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 BAP18Q8IXM2 172 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 PRR18Q8N4B5 295 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 CISD2Q8N5K1 135 aaKnown RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 TCTEX1D1Q8N7M0 179 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 NUP37Q8NFH4 326 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 OR5D13Q8NGL4 314 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 RNF141Q8WVD5 230 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 RBPMSQ93062 196 aaKnown RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 MRPL24Q96A35 216 aaKnown RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 OR10C1Q96KK4 312 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 SHARPINQ9H0F6 387 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 SEBOXQ9HB31 216 aaPredicted RBP5.85□□□□□ -1.47
USP39-219ENST00000496047 ZNF581Q9P0T4 197 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 IL36RNQ9UBH0 155 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 ZDHHC8Q9ULC8 765 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 LAMP3Q9UQV4 416 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 WIPI2Q9Y4P8 454 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 AUP1Q9Y679 476 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 POMT1Q9Y6A1 747 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 ACACAQ13085 2346 aa5.85□□□□□ -1.47
USP39-219ENST00000496047 SPTAN1Q13813 2472 aaKnown RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 RPS10-NUDT3A0A1W2PQS6 291 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 NKX6-3A6NJ46 265 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 LRRC30A6NM36 301 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 LEUTXA8MZ59 168 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 SRRM5B3KS81 715 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 KRBOX1C9JBD0 128 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 F8VVB4 439 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 F8VWA3 439 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 H0YL77 283 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 SCAF4O95104 1147 aaKnown RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 CFDP00746 253 aaPredicted RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 GAPDHP04406 335 aaKnown RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 ADH4P08319 380 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 WNT2P09544 360 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 SFTPCP11686 197 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 MMP9P14780 707 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 TNFRSF1AP19438 455 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 SPINK2P20155 84 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 UCP1P25874 307 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 P2RY1P47900 373 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 AKR1C2P52895 323 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 IGFBP7Q16270 282 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 TMEM30BQ3MIR4 351 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 ZNF818PQ6ZRF7 136 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 HSD17B13Q7Z5P4 300 aaPredicted RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 C1orf87Q8N0U7 546 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 GAPTQ8N292 157 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 ZNF645Q8N7E2 425 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 SLC35G3Q8N808 338 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 BVESQ8NE79 360 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 OR1S1Q8NH92 325 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 ANGPTL6Q8NI99 470 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 PLPPR1Q8TBJ4 325 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 ARL11Q969Q4 196 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 RRNAD1Q96FB5 475 aaKnown RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 MEGF10Q96KG7 1140 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 C18orf12Q96KH6 178 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 SNX22Q96L94 193 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 LURAP1Q96LR2 239 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 TAF9BQ9HBM6 251 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 MSL2Q9HCI7 577 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 MBNL3Q9NUK0 354 aaKnown RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 UFSP2Q9NUQ7 469 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 PRR13Q9NZ81 148 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 IL19Q9UHD0 177 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 ERRFI1Q9UJM3 462 aaPredicted RBP5.84□□□□□ -1.47
USP39-219ENST00000496047 CACNA1DQ01668 2161 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 PRR14LQ5THK1 2151 aa5.84□□□□□ -1.47
USP39-219ENST00000496047 IGLV3-9A0A075B6K5 115 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 A0A0G2JNJ9 132 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 A0A1B0GWJ7 208 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 ATP6V1G2-DDX39BF2Z307 99 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 TEX46H3BTG2 121 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 MGST3O14880 152 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 TMPRSS2O15393 492 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 MED6O75586 246 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 SLC25A6P12236 298 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 RCC1P18754 421 aaPredicted RBP5.83□□□□□ -1.48
USP39-219ENST00000496047 F2RP25116 425 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 CD40P25942 277 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 CFHR2P36980 270 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 ASCL1P50553 236 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 RPL23AP62750 156 aaKnown RBP5.83□□□□□ -1.48
USP39-219ENST00000496047 NKX6-1P78426 367 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms