RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 OR4D1Q15615 310 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 ACTBL2Q562R1 376 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 TMEM69Q5SWH9 247 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 GLYATQ6IB77 296 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 PAGE2Q7Z2X7 111 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 GALNT10Q86SR1 603 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 SGPP2Q8IWX5 399 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 OR2AE1Q8NHA4 323 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 OPTNQ96CV9 577 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 FMC1Q96HJ9 113 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 SEC22CQ9BRL7 303 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 LHX5Q9H2C1 402 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 IFT46Q9NQC8 304 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 DHCR7Q9UBM7 475 aaKnown RBP3.13□□□□□ -1.91
CCDC39-207ENST00000495817 FADS3Q9Y5Q0 445 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 USP54Q70EL1 1684 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 LY75O60449 1722 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 WDR90Q96KV7 1748 aa3.13□□□□□ -1.91
CCDC39-207ENST00000495817 CD163L1Q9NR16 1453 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 MYBPHLA2RUH7 354 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 SMLR1H3BR10 107 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 ITGB1BP1O14713 200 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 RGS5O15539 181 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 COCHO43405 550 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 FSTL3O95633 263 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 PRTN3P24158 256 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 CDC34P49427 236 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-207ENST00000495817 SLAMF1Q13291 335 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 ZBTB6Q15916 424 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 FAM131AQ6UXB0 335 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 DCXRQ7Z4W1 244 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 AKAP14Q86UN6 197 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 ZFP62Q8NB50 900 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-207ENST00000495817 OR6K3Q8NGY3 331 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 RORBQ92753 470 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 CCDC127Q96BQ5 260 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 SELENOSQ9BQE4 189 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 SUCNR1Q9BXA5 334 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 RBM12B-AS1Q9P1G2 102 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 SNX24Q9Y343 169 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 MON2Q7Z3U7 1717 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 RAB3GAP2Q9H2M9 1393 aa3.12□□□□□ -1.91
CCDC39-207ENST00000495817 C5P01031 1676 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 MIA3Q5JRA6 1907 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 PXDNLA1KZ92 1463 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 LTN1O94822 1766 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 AHSA1O95433 338 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 CD5P06127 495 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 PFN1P07737 140 aaKnown RBP3.11□□□□□ -1.91
CCDC39-207ENST00000495817 SLC2A1P11166 492 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 PSMB9P28065 219 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 CBX5P45973 191 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 RWDD2BP57060 319 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 OR2B6P58173 313 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 KRTAP10-10P60014 251 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 FLI1Q01543 452 aaPredicted RBP3.11□□□□□ -1.91
CCDC39-207ENST00000495817 TPBGQ13641 420 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 FLOT2Q14254 428 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 TTMPQ5BVD1 217 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 TMEM215Q68D42 235 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 LAMTOR1Q6IAA8 161 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 PHF10Q8WUB8 498 aaKnown RBP3.11□□□□□ -1.91
CCDC39-207ENST00000495817 ANGPTL4Q9BY76 406 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 POMKQ9H5K3 350 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 MRPL40Q9NQ50 206 aaKnown RBP3.11□□□□□ -1.91
CCDC39-207ENST00000495817 PAQR5Q9NXK6 330 aaPredicted RBP3.11□□□□□ -1.91
CCDC39-207ENST00000495817 PSMD13Q9UNM6 376 aa3.11□□□□□ -1.91
CCDC39-207ENST00000495817 IGLL5B9A064 214 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 FABP7O15540 132 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 SOD3P08294 240 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 SLC35E2BP0CK96 405 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 SCGB1C2P0DMR2 95 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 PTHLHP12272 177 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 M6PRP20645 277 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 TSPOP30536 169 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 GTF2A1P52655 376 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-207ENST00000495817 AQP5P55064 265 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 HBG1P69891 147 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 HBG2P69892 147 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 RGS21Q2M5E4 152 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 TMEM136Q6ZRR5 245 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 ZNF680Q8NEM1 530 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 SCGB1C1Q8TD33 95 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 APOL4Q9BPW4 351 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 SLC25A31Q9H0C2 315 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 NAGKQ9UJ70 344 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 C14orf166Q9Y224 244 aaKnown RBP3.1□□□□□ -1.91
CCDC39-207ENST00000495817 ZNF706Q9Y5V0 76 aaPredicted RBP3.1□□□□□ -1.91
CCDC39-207ENST00000495817 ANKRD36BQ8N2N9 1353 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 C4BP0C0L5 1744 aa3.1□□□□□ -1.91
CCDC39-207ENST00000495817 KCPQ6ZWJ8 1503 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 A0A1B0GTI1 187 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 LOC105371267A0A1B0GV96 52 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 A0A1B0GX12 115 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 A0A1W2PRG6 482 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 GOLGA8KD6RF30 607 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 I3L4J1 428 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 IGKV5-2P06315 115 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 MAGEA6P43360 314 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 RPS11P62280 158 aaKnown RBP eCLIP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms