RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 HAPLN4Q86UW8 402 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 OR8J1Q8NGP2 316 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 TMEM106AQ96A25 262 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 CCDC124Q96CT7 223 aaKnown RBP10.25□□□□□ -0.77
COL1A1-209ENST00000495677 PELI1Q96FA3 418 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 NABP2Q9BQ15 211 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 RANGRFQ9HD47 186 aaPredicted RBP10.25□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF581Q9P0T4 197 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 KIAA1456Q9P272 454 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 RNF150Q9ULK6 438 aa10.25□□□□□ -0.77
COL1A1-209ENST00000495677 TCRBV3S1A0A5B6 114 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 MAGEB3O15480 346 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 SPINT2O43291 252 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 MITFO75030 526 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-209ENST00000495677 OR7C1O76099 320 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-209ENST00000495677 HTR3BO95264 441 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 CALB2P22676 271 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 RBM11P57052 281 aaKnown RBP10.24□□□□□ -0.77
COL1A1-209ENST00000495677 CX3CL1P78423 397 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 NDPQ00604 133 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 KLF5Q13887 457 aaPredicted RBP10.24□□□□□ -0.77
COL1A1-209ENST00000495677 MOGAT2Q3SYC2 334 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 MORN2Q502X0 79 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 LY6G6FQ5SQ64 297 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 RNLSQ5VYX0 342 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 IL34Q6ZMJ4 242 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 ODF3L1Q8IXM7 274 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 GAPTQ8N292 157 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 OR52N1Q8NH53 320 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 UBALD1Q8TB05 177 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 CCDC107Q8WV48 283 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 TNFAIP8L1Q8WVP5 186 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 RSRP1Q9BUV0 290 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 TMED9Q9BVK6 235 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 JAM3Q9BX67 310 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 CNOT2Q9NZN8 540 aaKnown RBP10.24□□□□□ -0.77
COL1A1-209ENST00000495677 GNG12Q9UBI6 72 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 CEPT1Q9Y6K0 416 aa10.24□□□□□ -0.77
COL1A1-209ENST00000495677 SHISA3A0PJX4 238 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 AIPO00170 330 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 GEMIN2O14893 280 aaKnown RBP10.23□□□□□ -0.77
COL1A1-209ENST00000495677 IGHV3-11P01762 117 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 RAB3AP20336 220 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 CD40LGP29965 261 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 MECP2P51608 486 aaKnown RBP10.23□□□□□ -0.77
COL1A1-209ENST00000495677 ECSCRQ19T08 205 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 SYT6Q5T7P8 510 aaPredicted RBP10.23□□□□□ -0.77
COL1A1-209ENST00000495677 TRAT1Q6PIZ9 186 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 OR9G4Q8NGQ1 327 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 OR10K1Q8NGX5 313 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 GPER1Q99527 375 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 METTL9Q9H1A3 318 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 RIBC2Q9H4K1 309 aa10.23□□□□□ -0.77
COL1A1-209ENST00000495677 DAPL1A0PJW8 107 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 HBZP02008 142 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 T-ENOLP0DO92 83 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 LRRC36Q1X8D7 754 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 ACTBL2Q562R1 376 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 C6orf183Q5T699 404 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 LCN12Q6JVE5 192 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF554Q86TJ5 538 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 Q8N402 240 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 STX19Q8N4C7 294 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 CASTOR1Q8WTX7 329 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 TRUB1Q8WWH5 349 aaKnown RBP10.22□□□□□ -0.77
COL1A1-209ENST00000495677 DDB2Q92466 427 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 MYCBPQ99417 103 aaPredicted RBP10.22□□□□□ -0.77
COL1A1-209ENST00000495677 PAK1IP1Q9NWT1 392 aaPredicted RBP10.22□□□□□ -0.77
COL1A1-209ENST00000495677 TRAPPC2LQ9UL33 140 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 DHDHQ9UQ10 334 aa10.22□□□□□ -0.77
COL1A1-209ENST00000495677 TMEM212A6NML5 194 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 G3V2T6 193 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 RRHO14718 337 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 YPEL1O60688 119 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF780AO75290 641 aaPredicted RBP10.21□□□□□ -0.77
COL1A1-209ENST00000495677 LY6G6CO95867 125 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 TFAP2AP05549 437 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 TPPP2P59282 170 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 SLC25A30Q5SVS4 291 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 ATAD3CQ5T2N8 411 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 FAM71F2Q6NXP2 309 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF562Q6V9R5 426 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 ZNF833PQ6ZTB9 187 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 SPATA24Q86W54 205 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 CCDC197Q8NCU1 140 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 OR10V1Q8NGI7 309 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 OR51A2Q8NGJ7 313 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 OR2K2Q8NGT1 345 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 C4orf36Q96KX1 117 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 YPEL2Q96QA6 119 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 RNF5Q99942 180 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 THTPAQ9BU02 230 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 MRPL20Q9BYC9 149 aaKnown RBP10.21□□□□□ -0.77
COL1A1-209ENST00000495677 GABARAPL1Q9H0R8 117 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 SPACA1Q9HBV2 294 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 RETNQ9HD89 108 aa10.21□□□□□ -0.77
COL1A1-209ENST00000495677 MBNL3Q9NUK0 354 aaKnown RBP10.21□□□□□ -0.77
COL1A1-209ENST00000495677 RCC2Q9P258 522 aaKnown RBP10.21□□□□□ -0.77
COL1A1-209ENST00000495677 A0A0G2JLM5 398 aa10.2□□□□□ -0.78
COL1A1-209ENST00000495677 MCRIP1C9JLW8 97 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms