RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 IGKV1-5P01602 117 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 SERF2P84101 59 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 PCOLCEQ15113 449 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 ACY3Q96HD9 319 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 SMIM7Q9BQ49 75 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 PCGF1Q9BSM1 259 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 RNF150Q9ULK6 438 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 ESPL1Q14674 2120 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 ZNF737O75373 536 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 B3GALT5-AS1P59052 145 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 RAB4BP61018 213 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 CPT1CQ8TCG5 803 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 C1QTNF5Q9BXJ0 243 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 MTCH1Q9NZJ7 389 aa13.07□□□□□ -0.32
SDF4-207ENST00000494748 MMP7P09237 267 aaPredicted RBP13.06□□□□□ -0.32
SDF4-207ENST00000494748 IAPPP10997 89 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 DSCR4P56555 118 aaPredicted RBP13.06□□□□□ -0.32
SDF4-207ENST00000494748 CLDN15P56746 228 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 TNFRSF9Q07011 255 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 TMEM241Q24JQ0 296 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 TEX38Q6PEX7 206 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 ATG101Q9BSB4 218 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 G3V3Y1 287 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 HSPB6O14558 160 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
SDF4-207ENST00000494748 GALR1P47211 349 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 MEF2BQ02080 365 aaPredicted RBP13.06□□□□□ -0.32
SDF4-207ENST00000494748 ZNF66Q6ZN08 573 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 COLCA1Q6ZS62 124 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 CPEB3Q8NE35 698 aaKnown RBP13.06□□□□□ -0.32
SDF4-207ENST00000494748 TMEM68Q96MH6 324 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 SF3B5Q9BWJ5 86 aaKnown RBP13.06□□□□□ -0.32
SDF4-207ENST00000494748 A0A1B0GWJ7 208 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 SYNGR2O43760 224 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 BSXQ3C1V8 233 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 SLC25A24Q6NUK1 477 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 FAM180AQ6UWF9 173 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 SCGB1C1Q8TD33 95 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 OR4C12Q96R67 309 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 CACNG5Q9UF02 275 aa13.06□□□□□ -0.32
SDF4-207ENST00000494748 CYTIPO60759 359 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 GGCTO75223 188 aaKnown RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 CASP6P55212 293 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 TLE1Q04724 770 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 OR51H1Q8NH63 302 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 ZNF705GA8MUZ8 300 aaPredicted RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 TP53I11O14683 189 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 HRASP01112 189 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 TYMSP04818 313 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 USF2Q15853 346 aaPredicted RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 MRPL14Q6P1L8 145 aaKnown RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 SLC23A3Q6PIS1 610 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 GATAD1Q8WUU5 269 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 PRDM6Q9NQX0 595 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 PSENENQ9NZ42 101 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 EN2P19622 333 aaPredicted RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 FAM3BP58499 235 aaPredicted RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 RAC1P63000 192 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 ACSM6Q6P461 480 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 GGNQ86UU5 652 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 ZNF784Q8NCA9 323 aaPredicted RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 LSM10Q969L4 123 aaKnown RBP13.05□□□□□ -0.32
SDF4-207ENST00000494748 FOXB1Q99853 325 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 PARLQ9H300 379 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 PLK3Q9H4B4 646 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 OR2W1Q9Y3N9 320 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 CACNA1DQ01668 2161 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 FRYLO94915 3013 aa13.05□□□□□ -0.32
SDF4-207ENST00000494748 KIR2DS1A0A191URI9 304 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 ZNHIT1O43257 154 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 COX5BP10606 129 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 KIR2DS4P43632 304 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 ELLP55199 621 aaPredicted RBP13.04□□□□□ -0.32
SDF4-207ENST00000494748 KIR2DS1Q14954 304 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 ZNF585BQ52M93 769 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 SAXO1Q8IYX7 474 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 TRBV6-6A0A0A6YYG2 114 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 C3orf80F5H4A9 247 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
SDF4-207ENST00000494748 HOXA6P31267 233 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 CLEC12BQ2HXU8 276 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 CADM4Q8NFZ8 388 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 TAF15Q92804 592 aaKnown RBP eCLIP13.04□□□□□ -0.32
SDF4-207ENST00000494748 FUT9Q9Y231 359 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 CTXN2P0C2S0 81 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 FGF5P12034 268 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 PAX5Q02548 391 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 TCEAL6Q6IPX3 200 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 GBGT1Q8N5D6 347 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 SMRP1Q8NCR6 262 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 OR1K1Q8NGR3 316 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 STRADBQ9C0K7 418 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 PRDM14Q9GZV8 571 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 OR6C3Q9NZP0 311 aa13.04□□□□□ -0.32
SDF4-207ENST00000494748 PPP5D1E7EU14 171 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 TUBG1P23258 451 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 CEACAM16Q2WEN9 425 aa13.03□□□□□ -0.32
SDF4-207ENST00000494748 RPUSD4Q96CM3 377 aaKnown RBP13.03□□□□□ -0.32
SDF4-207ENST00000494748 KIR2DL5BA0A0G2JN68 375 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms