RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 MMDQ15546 238 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 KLHL22Q53GT1 634 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 ASPHD1Q5U4P2 390 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 LINC00596Q86U02 117 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 C8orf31Q8N9H6 132 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 RITA1Q96K30 269 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 BANF2Q9H503 90 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 FGF20Q9NP95 211 aaPredicted RBP9.85□□□□□ -0.83
SKA1-205ENST00000494518 PARP11Q9NR21 331 aa9.85□□□□□ -0.83
SKA1-205ENST00000494518 MRPS18AQ9NVS2 196 aaKnown RBP9.85□□□□□ -0.83
SKA1-205ENST00000494518 ZNF256Q9Y2P7 627 aaPredicted RBP9.85□□□□□ -0.83
SKA1-205ENST00000494518 MRPS28Q9Y2Q9 187 aaKnown RBP9.85□□□□□ -0.83
SKA1-205ENST00000494518 PNMA8CA0A1B0GUJ8 204 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 UBE2QL1A1L167 161 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 MCRIP1C9JLW8 97 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 SPINT2O43291 252 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 WBP4O75554 376 aaKnown RBP9.84□□□□□ -0.83
SKA1-205ENST00000494518 IGFBP3P17936 291 aaPredicted RBP9.84□□□□□ -0.83
SKA1-205ENST00000494518 LSAMPQ13449 338 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 RAB12Q6IQ22 244 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 GLIPR1L1Q6UWM5 242 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 JAGN1Q8N5M9 183 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 OR52L2PQ8NGH6 319 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 CASTOR1Q8WTX7 329 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 SMIM19Q96E16 107 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 C9orf16Q9BUW7 83 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 MRPL20Q9BYC9 149 aaKnown RBP9.84□□□□□ -0.83
SKA1-205ENST00000494518 ALX4Q9H161 411 aaPredicted RBP9.84□□□□□ -0.83
SKA1-205ENST00000494518 PAK1IP1Q9NWT1 392 aaPredicted RBP9.84□□□□□ -0.83
SKA1-205ENST00000494518 RCC2Q9P258 522 aaKnown RBP9.84□□□□□ -0.83
SKA1-205ENST00000494518 CLEC2DQ9UHP7 191 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 PEX16Q9Y5Y5 336 aa9.84□□□□□ -0.83
SKA1-205ENST00000494518 STARD9Q9P2P6 4700 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 ATP6V0E1O15342 81 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 TXNL1O43396 289 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 PPP1CCP36873 323 aaKnown RBP9.83□□□□□ -0.84
SKA1-205ENST00000494518 ZNF137PP52743 207 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 CCDC58Q4VC31 144 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 C6orf183Q5T699 404 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 AWAT2Q6E213 333 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 ZFP1Q6P2D0 407 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 TMEM65Q6PI78 240 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 TMPRSS11AQ6ZMR5 421 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 OVCH2Q7RTZ1 564 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 OR8H1Q8NGG4 311 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 OR1N2Q8NGR9 330 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 GHSRQ92847 366 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 SELENOIQ9C0D9 397 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 TAF9BQ9HBM6 251 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 ISYNA1Q9NPH2 558 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 OR2S2Q9NQN1 319 aa9.83□□□□□ -0.84
SKA1-205ENST00000494518 LYSTQ99698 3801 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 TNCP24821 2201 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 TRBV5-5A0A0J9YX44 114 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 OGG1O15527 345 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 ZNF780AO75290 641 aaPredicted RBP9.82□□□□□ -0.84
SKA1-205ENST00000494518 CRTAPO75718 401 aaPredicted RBP9.82□□□□□ -0.84
SKA1-205ENST00000494518 MAS1P04201 325 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 IGF1P05019 195 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 OR8U8P0C7N1 319 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 OR5H8P0DN80 308 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 BLVRBP30043 206 aaPredicted RBP9.82□□□□□ -0.84
SKA1-205ENST00000494518 PPIFP30405 207 aaKnown RBP9.82□□□□□ -0.84
SKA1-205ENST00000494518 OR3A3P47888 321 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 ACTBP60709 375 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 ZNF616Q08AN1 781 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 KIAA0141Q14154 515 aaPredicted RBP9.82□□□□□ -0.84
SKA1-205ENST00000494518 ECSCRQ19T08 205 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 Q3ZCU0 254 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 ZNF491Q8N8L2 437 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 MYOZ3Q8TDC0 251 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 DCUN1D4Q92564 292 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 FAM46BQ96A09 425 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 OR14A2Q96R54 314 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 ABHD14AQ9BUJ0 271 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 ANKRD60Q9BZ19 345 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 BABAM2Q9NXR7 383 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 GAR1Q9NY12 217 aaKnown RBP9.82□□□□□ -0.84
SKA1-205ENST00000494518 CKLFQ9UBR5 152 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 VSIG4Q9Y279 399 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 A3GALT2U3KPV4 340 aa9.82□□□□□ -0.84
SKA1-205ENST00000494518 IGHV7-81A0A0B4J1V7 117 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 TRAV41A0A0B4J266 112 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 C3orf84H3BNL1 204 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 I3L521 148 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 LANCL1O43813 399 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 MGMTP16455 207 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 MYL12AP19105 171 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 DCKP27707 260 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 SLURP1P55000 103 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 RPS11P62280 158 aaKnown RBP eCLIP9.81□□□□□ -0.84
SKA1-205ENST00000494518 NDPQ00604 133 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 GABPB1Q06547 395 aaPredicted RBP9.81□□□□□ -0.84
SKA1-205ENST00000494518 GPR176Q14439 515 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 Q499Y3 187 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 MORN2Q502X0 79 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 SBSPONQ8IVN8 264 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 ODF3L1Q8IXM7 274 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 UBE2E2Q96LR5 201 aa9.81□□□□□ -0.84
SKA1-205ENST00000494518 NABP2Q9BQ15 211 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms