RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CT45A3Q8NHU0 189 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 DCUN1D4Q92564 292 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 MUL1Q969V5 352 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 ST6GALNAC6Q969X2 333 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 UBE2E2Q96LR5 201 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 ABHD14AQ9BUJ0 271 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 RSRP1Q9BUV0 290 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 GHITMQ9H3K2 345 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 BANF2Q9H503 90 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 IFT22Q9H7X7 185 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 SPACA1Q9HBV2 294 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 IL36GQ9NZH8 169 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 ERGIC3Q9Y282 383 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 MRPS28Q9Y2Q9 187 aaKnown RBP7.5□□□□□ -1.21
UBR4-216ENST00000494503 RPL36Q9Y3U8 105 aaKnown RBP7.5□□□□□ -1.21
UBR4-216ENST00000494503 PEX16Q9Y5Y5 336 aa7.5□□□□□ -1.21
UBR4-216ENST00000494503 PNMA8CA0A1B0GUJ8 204 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 A0A1W2PPK0 400 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 NBR2O15453 112 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 CRTAPO75718 401 aaPredicted RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 ATP5HO75947 161 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 MAS1P04201 325 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 IGF1P05019 195 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 GP9P14770 177 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 RCC1P18754 421 aaPredicted RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 MYL12AP19105 171 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 CNTFRP26992 372 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 BLVRBP30043 206 aaPredicted RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 PPP1CCP36873 323 aaKnown RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 ZNF134P52741 427 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 CFHR3Q02985 330 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 GPR176Q14439 515 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 GNMTQ14749 295 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 NHLRC3Q5JS37 347 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 OR2G6Q5TZ20 316 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 RPL22L1Q6P5R6 122 aaKnown RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 TRAT1Q6PIZ9 186 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 GLIPR1L1Q6UWM5 242 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 ZNF491Q8N8L2 437 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 C8orf31Q8N9H6 132 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 OR52L2PQ8NGH6 319 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 OR6Q1Q8NGQ2 317 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 ARPC1AQ92747 370 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 FAM46BQ96A09 425 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 MRPS24Q96EL2 167 aaKnown RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 MRPL20Q9BYC9 149 aaKnown RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 ANKRD60Q9BZ19 345 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 SELENOIQ9C0D9 397 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 OR51J1Q9H342 316 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 TAF9BQ9HBM6 251 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 CHCHD3Q9NX63 227 aaKnown RBP7.49□□□□□ -1.21
UBR4-216ENST00000494503 TENM2Q9NT68 2774 aa7.49□□□□□ -1.21
UBR4-216ENST00000494503 MAGEA13PA6NCF6 341 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 LINC01619G3V211 115 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 I3L521 148 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 IGHV3-11P01762 117 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 VHLP40337 213 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 ETV1P50549 477 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 RAB9AP51151 201 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 ADARB1P78563 741 aaKnown RBP7.48□□□□□ -1.21
UBR4-216ENST00000494503 PITPNAQ00169 270 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 DOC2BQ14184 412 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 TMEM30BQ3MIR4 351 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 Q3ZCU0 254 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 ASPHD1Q5U4P2 390 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 LIN54Q6MZP7 749 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 ZNF529Q6P280 563 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 ASCL4Q6XD76 172 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 HAPLN4Q86UW8 402 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 ZFP41Q8N8Y5 198 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 ZNF555Q8NEP9 628 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 SETD6Q8TBK2 473 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 IL1F10Q8WWZ1 152 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 DLX4Q92988 240 aaPredicted RBP7.48□□□□□ -1.21
UBR4-216ENST00000494503 OR4C12Q96R67 309 aa7.48□□□□□ -1.21
UBR4-216ENST00000494503 CHMP1AQ9HD42 196 aaPredicted RBP7.48□□□□□ -1.21
UBR4-216ENST00000494503 IGHV4OR15-8A0A075B7B6 117 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 A0A087WW49 117 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 IGHV7-81A0A0B4J1V7 117 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 LOC100130705A0A1B0GUX0 176 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 TRIM64CA6NLI5 447 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 H7C2Y5 167 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 LANCL1O43813 399 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 RGS11O94810 467 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 HLA-DRB1P01911 266 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 GSTP1P09211 210 aaKnown RBP7.47□□□□□ -1.21
UBR4-216ENST00000494503 LIMS3P0CW19 117 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 LIMS4P0CW20 117 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 MGMTP16455 207 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 GABRB1P18505 474 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 CD40LGP29965 261 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 OR3A3P47888 321 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 TPPP2P59282 170 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 SMN1Q16637 294 aaKnown RBP7.47□□□□□ -1.21
UBR4-216ENST00000494503 C5orf64Q2M2E5 130 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 CCDC58Q4VC31 144 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 MORN2Q502X0 79 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 ZNF439Q8NDP4 499 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 OR2AK2Q8NG84 335 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms