RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 FAM90A13PP0C7W8 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A14PP0C7W9 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM90A24PP0C7X0 464 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF728P0DKX0 622 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 HLA-DOBP13765 273 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 EGR1P18146 543 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 MSR1P21757 451 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 GLRA1P23415 457 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF616Q08AN1 781 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM27E3Q08E93 113 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 PLPPR5Q32ZL2 321 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 TMEM176BQ3YBM2 270 aaPredicted RBP9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 KRBOX4Q5JUW0 171 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 ASCL4Q6XD76 172 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FAM219AQ8IW50 185 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF100Q8IYN0 542 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 OR10G3Q8NGC4 313 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 OR14L1PQ8NHC6 308 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 SGMS2Q8NHU3 365 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 IL22RA2Q969J5 263 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 WDYHV1Q96HA8 205 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 PGAM5Q96HS1 289 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 FOXN4Q96NZ1 517 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 ST6GALNAC5Q9BVH7 336 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 METTL9Q9H1A3 318 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 NELFAQ9H3P2 528 aa9.03□□□□□ -0.96
PDLIM1-205ENST00000493949 A0A096LNT2 108 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 A0A1W2PPH5 198 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 AQP7P3A6NL99 342 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 A6NLC8 198 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF732B4DXR9 585 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 C9JQL5 133 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 RPL36A-HNRNPH2H7BZ11 118 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 DNPH1O43598 174 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 CLN5O75503 358 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 PRH1P02810 166 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 WNT2P09544 360 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 OR5H8P0DN80 308 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF17P17021 662 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 GDF1P27539 372 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 CCKARP32238 428 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 FOXF1Q12946 379 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 KHDC3LQ587J8 217 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF506Q5JVG8 444 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 OR2A2Q6IF42 318 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 SLC22A25Q6T423 547 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 FBXW12Q6X9E4 464 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 LHFPL2Q6ZUX7 228 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 SLC16A13Q7RTY0 426 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 SLC22A8Q8TCC7 542 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 HPSE2Q8WWQ2 592 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 SPTSSAQ969W0 71 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 MOB3AQ96BX8 217 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 MUCL1Q96DR8 90 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 KLHDC3Q9BQ90 382 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 NAA11Q9BSU3 229 aaPredicted RBP9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 BANF2Q9H503 90 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF286AQ9HBT8 521 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 PLEKHJ1Q9NW61 149 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 MED29Q9NX70 200 aa9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 GAR1Q9NY12 217 aaKnown RBP9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 LSM5Q9Y4Y9 91 aaKnown RBP9.02□□□□□ -0.97
PDLIM1-205ENST00000493949 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 IGKV1D-43A0A0B4J1Z2 117 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 TRAV20A0A0B4J274 112 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 IGKV1-9A0A0C4DH69 117 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 LRP5LA4QPB2 252 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 HS3ST1O14792 307 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 TNFSF13O75888 250 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 KNG1P01042 644 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 TAGLN2P37802 199 aaKnown RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 PIGPP57054 158 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 RAB4BP61018 213 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 PMS2P11Q13670 270 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 KIAA0141Q14154 515 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF600Q6ZNG1 722 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF610Q8N9Z0 462 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 OR4D5Q8NGN0 318 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 RTN4IP1Q8WWV3 396 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 MRPL24Q96A35 216 aaKnown RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 BOD1Q96IK1 185 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 FAM71F1Q96KD3 344 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 RSRP1Q9BUV0 290 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 PAPOLGQ9BWT3 736 aaKnown RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 GFOD1Q9NXC2 390 aa9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 CHCHD2Q9Y6H1 151 aaPredicted RBP9.01□□□□□ -0.97
PDLIM1-205ENST00000493949 VWFP04275 2813 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 RBFOX3A6NFN3 312 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 ZNF587BE7ETH6 402 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 TRAPPC6AO75865 159 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 DFFBO76075 338 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 SLC25A6P12236 298 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 SRD5A1P18405 259 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 UCP1P25874 307 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 CSNK1A1P48729 337 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 HERV-K104P61576 105 aa9□□□□□ -0.97
PDLIM1-205ENST00000493949 TMEM249Q2WGJ8 235 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms