RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SNAP29O95721 258 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 FBP1P09467 338 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 ATF1P18846 271 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 ACTR1BP42025 376 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 SLAMF1Q13291 335 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 HTR4Q13639 388 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 PDGFRLQ15198 375 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 SYCP1Q15431 976 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 OR5C1Q8NGR4 320 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 ZNRF2Q8NHG8 242 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 CCDC127Q96BQ5 260 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 TAMM41Q96BW9 452 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 CAPZA3Q96KX2 299 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 CYTH2Q99418 400 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 ACBD6Q9BR61 282 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 GTSF1LQ9H1H1 148 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 SMDT1Q9H4I9 107 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 DMAC2Q9NW81 257 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 SCML1Q9UN30 329 aa1.28□□□□□ -2.2
SMC4-223ENST00000493695 EFCAB9A8MZ26 197 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 MKRN2OSH3BPM6 223 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 CRTAPO75718 401 aaPredicted RBP1.27□□□□□ -2.21
SMC4-223ENST00000493695 GTF2BQ00403 316 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 ZNF117Q03924 483 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 BSPH1Q075Z2 132 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 TMEM176BQ3YBM2 270 aaPredicted RBP1.27□□□□□ -2.21
SMC4-223ENST00000493695 MRPL51Q4U2R6 128 aaKnown RBP1.27□□□□□ -2.21
SMC4-223ENST00000493695 ACSBG2Q5FVE4 666 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 TIMM23BQ5SRD1 257 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 OR4K13Q8NH42 304 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 OR5K1Q8NHB7 308 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 DYNC2LI1Q8TCX1 351 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 GNB1LQ9BYB4 327 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 LRRC19Q9H756 370 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 UBQLN4Q9NRR5 601 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 TMEM216Q9P0N5 145 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 WASHC3Q9Y3C0 194 aa1.27□□□□□ -2.21
SMC4-223ENST00000493695 MRPS16Q9Y3D3 137 aaKnown RBP1.27□□□□□ -2.21
SMC4-223ENST00000493695 PLCH2O75038 1416 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 MAP3K19Q56UN5 1328 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 MUC21A0A0G2JKD1 596 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 MUC21A0A140T8X8 626 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 IQCF5A8MTL0 148 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 B4DEV8 164 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 F5H5K5 113 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 SULT1C2O00338 296 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 TNFAIP8O95379 198 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 CRYGDP07320 174 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 P0DMU3 169 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 FAM231AP0DMU4 169 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 FAM231CP0DMU5 169 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 ZNF7P17097 686 aaPredicted RBP1.26□□□□□ -2.21
SMC4-223ENST00000493695 GADD45AP24522 165 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 PSMA1P25786 263 aaKnown RBP1.26□□□□□ -2.21
SMC4-223ENST00000493695 STC1P52823 247 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 FGF12P61328 243 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 TSPAN31Q12999 210 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 EXOC3L4Q17RC7 722 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 CENPWQ5EE01 88 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 ZBTB8OSQ8IWT0 167 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 PPWD1Q96BP3 646 aaKnown RBP1.26□□□□□ -2.21
SMC4-223ENST00000493695 DNAJC30Q96LL9 226 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 TMEM56Q96MV1 263 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 ZNF251Q9BRH9 671 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 C11orf1Q9H5F2 150 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 TAS2R9Q9NYW1 312 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 OTOFQ9HC10 1997 aa1.26□□□□□ -2.21
SMC4-223ENST00000493695 OVOL1O14753 267 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 MPZL2O60487 215 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 SCN2BO60939 215 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 GABRA3P34903 492 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 RCVRNP35243 200 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 PSMB3P49720 205 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 AKR1C2P52895 323 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 DLX6P56179 175 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 GABARAPL2P60520 117 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 RAB8AP61006 207 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 LRRC26Q2I0M4 334 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 TMEM75Q8N9X5 138 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 RNASEH2CQ8TDP1 164 aaKnown RBP1.25□□□□□ -2.21
SMC4-223ENST00000493695 TMBIM1Q969X1 311 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 TBX5Q99593 518 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 EBNA1BP2Q99848 306 aaKnown RBP1.25□□□□□ -2.21
SMC4-223ENST00000493695 ZNF426Q9BUY5 554 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 TTTY12Q9BZ98 90 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 ASCL3Q9NQ33 180 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 FBXL3Q9UKT7 428 aa1.25□□□□□ -2.21
SMC4-223ENST00000493695 TRPM6Q9BX84 2022 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 A0A0J9YX75 114 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 C9J4A7 227 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 GOLGA8RI6L899 631 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 M0QYV0 167 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 TOR1AO14656 332 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 CDK14O94921 469 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 RAB36O95755 333 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 IGLV3-27P01718 113 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 PRB1P04280 392 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 OR4A8P0C604 315 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 IFI30P13284 250 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 NQO1P15559 274 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms