RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 SF3A2Q15428 464 aaKnown RBP3.26□□□□□ -1.89
SMG7-208ENST00000493609 HES3Q5TGS1 186 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 H3F3CQ6NXT2 135 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 C5orf46Q6UWT4 87 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 SHISA6Q6ZSJ9 500 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 CALHM1Q8IU99 346 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 CLDN22Q8N7P3 220 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 OR5T3Q8NGG3 340 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 OR5K1Q8NHB7 308 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 CDC26Q8NHZ8 85 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 TAMM41Q96BW9 452 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 NARS2Q96I59 477 aaKnown RBP3.26□□□□□ -1.89
SMG7-208ENST00000493609 OR10C1Q96KK4 312 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 PRRC1Q96M27 445 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 COL21A1Q96P44 957 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 SDF2Q99470 211 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 C9orf16Q9BUW7 83 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 ZNF426Q9BUY5 554 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 OSBPL11Q9BXB4 747 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 SLC19A3Q9BZV2 496 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 ARMC7Q9H6L4 198 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 NEK6Q9HC98 313 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 RETNQ9HD89 108 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 CCDC59Q9P031 241 aaKnown RBP3.26□□□□□ -1.89
SMG7-208ENST00000493609 DHCR7Q9UBM7 475 aaKnown RBP3.26□□□□□ -1.89
SMG7-208ENST00000493609 SLC35A3Q9Y2D2 325 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 LRRC42Q9Y546 428 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 TSSC4Q9Y5U2 329 aaPredicted RBP3.26□□□□□ -1.89
SMG7-208ENST00000493609 ENPP4Q9Y6X5 453 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 HSPE1-MOB4S4R3N1 261 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 EP300Q09472 2414 aaPredicted RBP3.26□□□□□ -1.89
SMG7-208ENST00000493609 PIEZO1Q92508 2521 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 AHCTF1Q8WYP5 2266 aa3.26□□□□□ -1.89
SMG7-208ENST00000493609 RIF1Q5UIP0 2472 aaKnown RBP3.26□□□□□ -1.89
SMG7-208ENST00000493609 KIAA1549Q9HCM3 1950 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 CACNA1GO43497 2377 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 CACNA1AO00555 2505 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 A0A0U1RQV1 116 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 C7orf66A4D0T2 115 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 ZNF860A6NHJ4 632 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 C5orf58C9J3I9 102 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 ANKRD65E5RJM6 399 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 KCNK2O95069 426 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 OR5F1O95221 314 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 EPPINO95925 133 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 APCSP02743 223 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 LIPCP11150 499 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 COX6A1P12074 109 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 ANXA8P13928 327 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 RBM34P42696 430 aaKnown RBP3.25□□□□□ -1.89
SMG7-208ENST00000493609 P2RX1P51575 399 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 TRMT12Q53H54 448 aaKnown RBP3.25□□□□□ -1.89
SMG7-208ENST00000493609 KDM4DQ6B0I6 523 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 OR2T5Q6IEZ7 315 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 FAHD1Q6P587 224 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 TNFAIP8L2Q6P589 184 aaPredicted RBP3.25□□□□□ -1.89
SMG7-208ENST00000493609 ZNF880Q6PDB4 577 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 NPSR1Q6W5P4 371 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 CYP4Z1Q86W10 505 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 SPATA24Q86W54 205 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 RAB43Q86YS6 212 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 RNF182Q8N6D2 247 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 COX18Q8N8Q8 333 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 GPR32P1Q8NGA4 272 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 OR4K5Q8NGD3 323 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 OR52R1Q8NGF1 315 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 OR2T29Q8NH02 315 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 OR5AK3PQ8NH89 298 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 LYPD6BQ8NI32 183 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 PYDC1Q8WXC3 89 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 RGP1Q92546 391 aaPredicted RBP3.25□□□□□ -1.89
SMG7-208ENST00000493609 FLYWCH2Q96CP2 140 aaKnown RBP3.25□□□□□ -1.89
SMG7-208ENST00000493609 LINC00477Q96M19 166 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 PITX2Q99697 317 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 CHID1Q9BWS9 393 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 ANKRD60Q9BZ19 345 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 ULBP3Q9BZM4 244 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 CACYBPQ9HB71 228 aaKnown RBP3.25□□□□□ -1.89
SMG7-208ENST00000493609 BEX1Q9HBH7 125 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 ASCL3Q9NQ33 180 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 UBQLN4Q9NRR5 601 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 SLC39A1Q9NY26 324 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 C3orf18Q9UK00 162 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 ZNF443Q9Y2A4 671 aaPredicted RBP3.25□□□□□ -1.89
SMG7-208ENST00000493609 C15orf41Q9Y2V0 281 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 EML6Q6ZMW3 1958 aa3.25□□□□□ -1.89
SMG7-208ENST00000493609 DCHS1Q96JQ0 3298 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 TRBV9A0A0B4J1U6 114 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 A0A0B4J2E0 115 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 A0A1B0GX12 115 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 M0QX08 132 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 DENRO43583 198 aaKnown RBP3.24□□□□□ -1.89
SMG7-208ENST00000493609 CHP2O43745 196 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 FADS1O60427 444 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 CDC40O60508 579 aaKnown RBP eCLIP3.24□□□□□ -1.89
SMG7-208ENST00000493609 MRPS14O60783 128 aaKnown RBP3.24□□□□□ -1.89
SMG7-208ENST00000493609 DNAJB6O75190 326 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 CCNKO75909 580 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 YIF1AO95070 293 aa3.24□□□□□ -1.89
SMG7-208ENST00000493609 MPZL1O95297 269 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms