RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 OPN1MW2P0DN77 364 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 OPN1MW3P0DN78 364 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 TMEM11P17152 192 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 SRMP19623 302 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 MAP2K4P45985 399 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 ZNF134P52741 427 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 RPS25P62851 125 aaKnown RBP8.47□□□□□ -1.05
COL6A3-214ENST00000493608 EMX1Q04741 257 aaPredicted RBP8.47□□□□□ -1.05
COL6A3-214ENST00000493608 HSD17B12Q53GQ0 312 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 TCTEX1D4Q5JR98 221 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 GLT8D1Q68CQ7 371 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 SLC16A12Q6ZSM3 486 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 THNSL2Q86YJ6 484 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 NKAIN3Q8N8D7 197 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 UFD1Q92890 307 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 DUSP21Q9H596 190 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 GNG12Q9UBI6 72 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 LINC00527Q9UJ94 153 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 TGP01266 2768 aa8.47□□□□□ -1.05
COL6A3-214ENST00000493608 IGHV1-3A0A0C4DH29 117 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 TCRBV4S1A1TA0A5B7 111 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 ZNF736B4DX44 427 aaPredicted RBP8.46□□□□□ -1.06
COL6A3-214ENST00000493608 SPINT2O43291 252 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 RGS10O43665 173 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 PDCD6O75340 191 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 RAB7AP51149 207 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 CD83Q01151 205 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 ID3Q02535 119 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 P2RY14Q15391 338 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 IZUMO2Q6UXV1 221 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 TMEM91Q6ZNR0 172 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 NDUFA11Q86Y39 141 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 OR8H3Q8N146 312 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 LINC00311Q8N616 119 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 OR52L2PQ8NGH6 319 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 OR52M1Q8NGK5 317 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 THRSPQ92748 146 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 CNBD2Q96M20 576 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 SULT4A1Q9BR01 284 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 NICN1Q9BSH3 213 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 FAAP24Q9BTP7 215 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 ANKRD60Q9BZ19 345 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 TAF9BQ9HBM6 251 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 MOB4Q9Y3A3 225 aa8.46□□□□□ -1.06
COL6A3-214ENST00000493608 AK6Q9Y3D8 172 aaKnown RBP8.46□□□□□ -1.06
COL6A3-214ENST00000493608 FAM90A10PA6NDY2 464 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 FAM90A7PA6NKC0 464 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 LINC01548A6NM66 108 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 FAM90A23PA8MXZ1 464 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 SC5DO75845 299 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 UCHL1P09936 223 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 CRHBPP24387 322 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 HTR2CP28335 458 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 ZNF816Q0VGE8 651 aaPredicted RBP8.45□□□□□ -1.06
COL6A3-214ENST00000493608 UNC119Q13432 240 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 GNMTQ14749 295 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 CT45A1Q5HYN5 189 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 C1orf100Q5SVJ3 147 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 C6orf183Q5T699 404 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 C6orf201Q7Z4U5 140 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 ZNF329Q86UD4 541 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 GAPTQ8N292 157 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 C5orf56Q8N8D9 126 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 CT45A3Q8NHU0 189 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 MRPL30Q8TCC3 161 aaKnown RBP8.45□□□□□ -1.06
COL6A3-214ENST00000493608 RTN4IP1Q8WWV3 396 aaPredicted RBP8.45□□□□□ -1.06
COL6A3-214ENST00000493608 EAF1Q96JC9 268 aaPredicted RBP8.45□□□□□ -1.06
COL6A3-214ENST00000493608 NOL4LQ96MY1 436 aaPredicted RBP8.45□□□□□ -1.06
COL6A3-214ENST00000493608 NEDD4LQ96PU5 975 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 GFI1Q99684 422 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 CST11Q9H112 138 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 OR2S2Q9NQN1 319 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 GHRLQ9UBU3 117 aa8.45□□□□□ -1.06
COL6A3-214ENST00000493608 A0A0A6YYD4 124 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 NCBP2LA6PVI3 153 aaKnown RBP8.44□□□□□ -1.06
COL6A3-214ENST00000493608 M0QZK8 103 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 GLAP06280 429 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 UBBP0CG47 229 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 CHATP28329 748 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 PPP1CCP36873 323 aaKnown RBP8.44□□□□□ -1.06
COL6A3-214ENST00000493608 RPS27AP62979 156 aaKnown RBP8.44□□□□□ -1.06
COL6A3-214ENST00000493608 FABP5Q01469 135 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 TPBGQ13641 420 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 MORN2Q502X0 79 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 KHDC1LQ5JSQ8 128 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 SLC25A48Q6ZT89 311 aaKnown RBP8.44□□□□□ -1.06
COL6A3-214ENST00000493608 PRSS48Q7RTY5 328 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 ZNF439Q8NDP4 499 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 OR4F17Q8NGA8 305 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 PHYHIPQ92561 330 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 ST6GALNAC6Q969X2 333 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 OR4F4Q96R69 305 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 MGLLQ99685 303 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 TMEM59Q9BXS4 323 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 VCX3BQ9H321 246 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 PLGRKTQ9HBL7 147 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 KCNIP1Q9NZI2 227 aa8.44□□□□□ -1.06
COL6A3-214ENST00000493608 PSMB11A5LHX3 300 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 SERPINE3A8MV23 424 aa8.43□□□□□ -1.06
COL6A3-214ENST00000493608 TMEM14DPA8MWL7 114 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms