RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 B4GALT7Q9UBV7 327 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 TRAPPC2LQ9UL33 140 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 HS3ST2Q9Y278 367 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 TRAV9-2A0A087WT02 112 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 MDFIC2A0A1B0GVS7 189 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 LINC01553A4QN01 128 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 F2Z2F3 143 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 MSTNO14793 375 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 NEURL1O76050 574 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 CA1P00915 261 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-205ENST00000493587 CD1AP06126 327 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 KITLGP21583 273 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 NPY1RP25929 384 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 PSMB3P49720 205 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 LCN2P80188 198 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 ZFP36L1Q07352 338 aaKnown RBP5.93□□□□□ -1.46
VPS13B-205ENST00000493587 BVES-AS1Q5T3Y7 98 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 TMEM215Q68D42 235 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 SLC25A34Q6PIV7 304 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 LINC00696Q6ZRV3 163 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 UBE2E3Q969T4 207 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 NUS1Q96E22 293 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 SCARF2Q96GP6 870 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-205ENST00000493587 FAM110AQ9BQ89 295 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 SPCS1Q9Y6A9 102 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 KIAA1549Q9HCM3 1950 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 SNRNP200O75643 2136 aaKnown RBP5.93□□□□□ -1.46
VPS13B-205ENST00000493587 GRXCR1A8MXD5 290 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 CD5LO43866 347 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 SPINK4O60575 86 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 KBTBD11O94819 623 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 S1PR2O95136 353 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 CA7P43166 264 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 IER3P46695 156 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 GPM6AP51674 278 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 TMPRSS3P57727 454 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 FXYD4P59646 89 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 TCTEX1D4Q5JR98 221 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 SPATA31B1PQ5VZV4 182 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 RPS4Y2Q8TD47 263 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 RNF183Q96D59 192 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF681Q96N22 645 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 EFCAB11Q9BUY7 163 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 SLC39A9Q9NUM3 307 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 RNF114Q9Y508 228 aa5.93□□□□□ -1.46
VPS13B-205ENST00000493587 TIMM8BQ9Y5J9 83 aaPredicted RBP5.93□□□□□ -1.46
VPS13B-205ENST00000493587 MPDZO75970 2070 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 A0A1W2PR80 420 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 A0A1W2PRU2 124 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 A4D1N5 150 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 SNURFLB1AK76 121 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 C17orf112F2Z3M2 114 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 SNAI2O43623 268 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 SSSCA1O60232 199 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 BRI3O95415 125 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 GPX1P07203 203 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 RHOCP08134 193 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 MGST1P10620 155 aaKnown RBP5.92□□□□□ -1.46
VPS13B-205ENST00000493587 CD70P32970 193 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 RPL32P62910 135 aaKnown RBP5.92□□□□□ -1.46
VPS13B-205ENST00000493587 OR1Q1Q15612 314 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 BRICD5Q6PL45 260 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 DHRS13Q6UX07 377 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 STPG3Q8N7X2 389 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 DCAF4L2Q8NA75 395 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 VN1R2Q8NFZ6 395 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 RNF133Q8WVZ7 376 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 WDR61Q9GZS3 305 aaKnown RBP5.92□□□□□ -1.46
VPS13B-205ENST00000493587 VCX2Q9H322 139 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 ELOVL3Q9HB03 270 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 NGBQ9NPG2 151 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 MRPL16Q9NX20 251 aaKnown RBP5.92□□□□□ -1.46
VPS13B-205ENST00000493587 LRIT1Q9P2V4 623 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 ERRFI1Q9UJM3 462 aaPredicted RBP5.92□□□□□ -1.46
VPS13B-205ENST00000493587 RARRES3Q9UL19 164 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 TRIOO75962 3097 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 TRBV5-5A0A0J9YX44 114 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 TBL1XO60907 577 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 HSBP1O75506 76 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 NDUFB2O95178 105 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 MT-ATP6P00846 226 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 DYNLT3P51808 116 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 MTCP1P56278 107 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 ZP4Q12836 540 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 GAGE5Q13069 117 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 GAGE6Q13070 117 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 COLCA1Q6ZS62 124 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 DTWD2Q8NBA8 298 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 OR10G4Q8NGN3 311 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 OR10AG1Q8NH19 301 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 OR52E5Q8NH55 327 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 MRPL30Q8TCC3 161 aaKnown RBP5.92□□□□□ -1.46
VPS13B-205ENST00000493587 FER1L6-AS2Q96M78 137 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 UHRF2Q96PU4 802 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 ZNF286AQ9HBT8 521 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 BCL2L10Q9HD36 194 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 OBP2AQ9NY56 170 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 PLEK2Q9NYT0 353 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 NAT8BQ9UHF3 227 aa5.92□□□□□ -1.46
VPS13B-205ENST00000493587 A0A087X0K7 114 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms