RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 DEFA4P12838 97 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PHYHD1Q5SRE7 291 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 GJC3Q8NFK1 279 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 OR1L6Q8NGR2 347 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 REPIN1Q9BWE0 567 aaKnown RBP10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PCED1AQ9H1Q7 454 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PLSCR2Q9NRY7 297 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PSENENQ9NZ42 101 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 PCDH15Q96QU1 1955 aa10.01□□□□□ -0.81
HDAC4-210ENST00000493582 WDR87Q6ZQQ6 2873 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 UBE2L5PA0A1B0GUS4 154 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 HSPB6O14558 160 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 PAGE4O60829 102 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 NPPCP23582 126 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 SOX8P57073 446 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 KCNMB1Q16558 191 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF441Q8N8Z8 693 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 OR10V1Q8NGI7 309 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 MYO9BQ13459 2157 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 LINC00310P59036 64 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 LCN2P80188 198 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 PRDX4Q13162 271 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 SPANXN5Q5MJ07 72 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 LEMD1Q68G75 181 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF709Q8N972 641 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 SPSB1Q96BD6 273 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 WDR61Q9GZS3 305 aaKnown RBP10□□□□□ -0.81
HDAC4-210ENST00000493582 DIDO1Q9BTC0 2240 aaKnown RBP10□□□□□ -0.81
HDAC4-210ENST00000493582 SERF1AO75920 110 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 RNF151Q2KHN1 245 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 TMEM211Q6ICI0 200 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 ZDHHC23Q8IYP9 409 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 RAB40CQ96S21 281 aa10□□□□□ -0.81
HDAC4-210ENST00000493582 TRBV11-1A0A0K0K1C0 115 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 F2Z2F3 143 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 SYNGR2O43760 224 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 PGLYRP1O75594 196 aaPredicted RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 C1QTNF9P0C862 333 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 MSR1P21757 451 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 TPPP2P59282 170 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 UBE2NP61088 152 aaKnown RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 PPP1CBP62140 327 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 PMP22Q01453 160 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 HIST3H3Q16695 136 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 ACSM6Q6P461 480 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 SGMS2Q8NHU3 365 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 PINX1Q96BK5 328 aaKnown RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 ZDHHC11Q9H8X9 412 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 TUBG2Q9NRH3 451 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 RYDENQ9NUL5 291 aaKnown RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 CACNG5Q9UF02 275 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 RNF114Q9Y508 228 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 OR5G3P0C626 314 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 PSG2P11465 335 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 RANP62826 216 aaKnown RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 DAZAP2Q15038 168 aaPredicted RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 OR8G2PQ6IF36 304 aa9.99□□□□□ -0.81
HDAC4-210ENST00000493582 FBXO46Q6PJ61 603 aaPredicted RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 TAF15Q92804 592 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■□□□□ 11.1
HDAC4-210ENST00000493582 ALKBH3Q96Q83 286 aaPredicted RBP9.99□□□□□ -0.81
HDAC4-210ENST00000493582 CRYAAP02489 173 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 WNT2P09544 360 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 TDGF1P13385 188 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 COMPP49747 757 aaPredicted RBP9.98□□□□□ -0.81
HDAC4-210ENST00000493582 SELENOTP62341 195 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 AARDQ4LEZ3 155 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 LYG1Q8N1E2 194 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 OR5D13Q8NGL4 314 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
HDAC4-210ENST00000493582 MRGPRX1Q96LB2 322 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 FAM103A1Q9BTL3 118 aaKnown RBP9.98□□□□□ -0.81
HDAC4-210ENST00000493582 DERL1Q9BUN8 251 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 GAL3ST2Q9H3Q3 398 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 KLRF1Q9NZS2 232 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 TRAV34A0A0B4J273 112 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 NKX6-3A6NJ46 265 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 SERPINE2P07093 398 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 BPIFB3P59826 476 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 TMEM144Q7Z5S9 345 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 OR5AU1Q8NGC0 362 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 OXGR1Q96P68 337 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 ESPL1Q14674 2120 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 NRASP01111 189 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 CBLN1P23435 193 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 F2RP25116 425 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 MPLP40238 635 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 RBM11P57052 281 aaKnown RBP9.98□□□□□ -0.81
HDAC4-210ENST00000493582 YPEL5P62699 121 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 HBG1P69891 147 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 HBG2P69892 147 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 SHBQ15464 509 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 ACSF3Q4G176 576 aaPredicted RBP9.98□□□□□ -0.81
HDAC4-210ENST00000493582 LINC01551Q86U37 167 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 ZNF114Q8NC26 417 aa9.98□□□□□ -0.81
HDAC4-210ENST00000493582 ITGB1BP1O14713 200 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 OTX1P32242 354 aaPredicted RBP9.97□□□□□ -0.81
HDAC4-210ENST00000493582 CAPZBP47756 277 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 KRTDAPP60985 99 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 PAFAH1B2P68402 229 aa9.97□□□□□ -0.81
HDAC4-210ENST00000493582 CNN3Q15417 329 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms