RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PSORS1C1Q9UIG5 152 aa9.82□□□□□ -0.84
COL6A1-205ENST00000492851 ZNF580Q9UK33 172 aa9.82□□□□□ -0.84
COL6A1-205ENST00000492851 IGHV3-43A0A0B4J1X8 118 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 IGHV3-72A0A0B4J1Y9 119 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 K7EIL1 84 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 LANCL1O43813 399 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 IGHV3-43DP0DP04 118 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 RANBP1P43487 201 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 KIR2DS1Q14954 304 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 MORN2Q502X0 79 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 CT45A1Q5HYN5 189 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 VAX1Q5SQQ9 334 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 RNLSQ5VYX0 342 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 GLT8D1Q68CQ7 371 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 PRR18Q8N4B5 295 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 NANOGP1Q8N7R0 232 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 RNF152Q8N8N0 203 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 ZNF439Q8NDP4 499 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 OR8U1Q8NH10 309 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 OR4K15Q8NH41 348 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 CT45A3Q8NHU0 189 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 Q96M66 194 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 DCLRE1BQ9H816 532 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 TAF9BQ9HBM6 251 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 LINC00527Q9UJ94 153 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 JPT1Q9UK76 154 aa9.81□□□□□ -0.84
COL6A1-205ENST00000492851 KIAA2026Q5HYC2 2103 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 MAGEA13PA6NCF6 341 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 H0YHG0 523 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 CCL24O00175 119 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 YPEL1O60688 119 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 PDCD6O75340 191 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 IGF1P05019 195 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 RCC1P18754 421 aaPredicted RBP9.8□□□□□ -0.84
COL6A1-205ENST00000492851 ZNF134P52741 427 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 KRTAP10-11P60412 298 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 DGCR2P98153 550 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 ETV3LQ6ZN32 361 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 AHSA2Q719I0 299 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 LYPD6Q86Y78 171 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 FAM71E2Q8N5Q1 922 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 BPIFB6Q8NFQ5 453 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 OR5M8Q8NGP6 311 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 UBALD1Q8TB05 177 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 PHYHIPQ92561 330 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 GALMQ96C23 342 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 NEDD4LQ96PU5 975 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 YPEL2Q96QA6 119 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 GHITMQ9H3K2 345 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 BANF2Q9H503 90 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 ABRACLQ9P1F3 81 aa9.8□□□□□ -0.84
COL6A1-205ENST00000492851 PNMA8CA0A1B0GUJ8 204 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 UBE2QL1A1L167 161 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 LINC01548A6NM66 108 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 IGHG4P01861 327 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 HOXD3P31249 432 aaPredicted RBP9.79□□□□□ -0.84
COL6A1-205ENST00000492851 VHLP40337 213 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 CD69Q07108 199 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 RCN1Q15293 331 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 ACSM3Q53FZ2 586 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 OR10V1Q8NGI7 309 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 OR1L1Q8NH94 360 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 KCNG3Q8TAE7 436 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 FBLIM1Q8WUP2 373 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 TFAP2CQ92754 450 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 ABHD14AQ9BUJ0 271 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 MND1Q9BWT6 205 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 RIMS4Q9H426 269 aaPredicted RBP9.79□□□□□ -0.84
COL6A1-205ENST00000492851 STEAP1Q9UHE8 339 aa9.79□□□□□ -0.84
COL6A1-205ENST00000492851 WI2-2373I1.2A0A1W2PRP0 233 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 ZNF736B4DX44 427 aaPredicted RBP9.78□□□□□ -0.84
COL6A1-205ENST00000492851 SLC31A2O15432 143 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 BPNT1O95861 308 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 RPLP1P05386 114 aaKnown RBP9.78□□□□□ -0.84
COL6A1-205ENST00000492851 F2RL1P55085 397 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 LSAMPQ13449 338 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 C9orf66Q5T8R8 295 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 OGFRL1Q5TC84 451 aaPredicted RBP9.78□□□□□ -0.84
COL6A1-205ENST00000492851 FAM71F2Q6NXP2 309 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 TMEM65Q6PI78 240 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 LCNL1Q6ZST4 164 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 OR2AK2Q8NG84 335 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 B9D2Q9BPU9 175 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 ZNF251Q9BRH9 671 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.78□□□□□ -0.84
COL6A1-205ENST00000492851 SCN3BQ9NY72 215 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 PIPOXQ9P0Z9 390 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 ZNF107Q9UII5 783 aaPredicted RBP9.78□□□□□ -0.84
COL6A1-205ENST00000492851 NOTCH3Q9UM47 2321 aa9.78□□□□□ -0.84
COL6A1-205ENST00000492851 ERICH4A6NGS2 130 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 CASQ2O14958 399 aaPredicted RBP9.77□□□□□ -0.85
COL6A1-205ENST00000492851 CDK1P06493 297 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 GNAO1P09471 354 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 SRMP19623 302 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 RAB25P57735 213 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 CFHR3Q02985 330 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 MMDQ15546 238 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 NKAPLQ5M9Q1 402 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 C1orf100Q5SVJ3 147 aa9.77□□□□□ -0.85
COL6A1-205ENST00000492851 SIGIRRQ6IA17 410 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms