RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 NKAPLQ5M9Q1 402 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 TRAT1Q6PIZ9 186 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 LCNL1Q6ZST4 164 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 COMMD1Q8N668 190 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 RASL11BQ9BPW5 248 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 OR2S2Q9NQN1 319 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 ZFP57Q9NU63 452 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 ERGIC3Q9Y282 383 aa13.58□□□□□ -0.24
SGMS1-204ENST00000492601 TXNL1O43396 289 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 PDCD6O75340 191 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 CA11O75493 328 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 RPLP1P05386 114 aaKnown RBP13.57□□□□□ -0.24
SGMS1-204ENST00000492601 ZNF137PP52743 207 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 GABPB1Q06547 395 aaPredicted RBP13.57□□□□□ -0.24
SGMS1-204ENST00000492601 GPR50Q13585 617 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 GNMTQ14749 295 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 TMEM30BQ3MIR4 351 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 DEFB121Q5J5C9 76 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 FAM27D1Q5T7N8 215 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 TEX38Q6PEX7 206 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 ZNF695Q8IW36 515 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 OR52L2PQ8NGH6 319 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 MRPL30Q8TCC3 161 aaKnown RBP13.57□□□□□ -0.24
SGMS1-204ENST00000492601 UQCC2Q9BRT2 126 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 FKBP14Q9NWM8 211 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 KCNIP1Q9NZI2 227 aa13.57□□□□□ -0.24
SGMS1-204ENST00000492601 ANKRD65E5RJM6 399 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 CASQ2O14958 399 aaPredicted RBP13.56□□□□□ -0.24
SGMS1-204ENST00000492601 GLAP06280 429 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 PPP1CCP36873 323 aaKnown RBP13.56□□□□□ -0.24
SGMS1-204ENST00000492601 MYCNOSP40205 109 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 GP2P55259 537 aaKnown RBP13.56□□□□□ -0.24
SGMS1-204ENST00000492601 EGFEM1PQ0D2K5 195 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 MORN2Q502X0 79 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 ACSM3Q53FZ2 586 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 OR10K2Q6IF99 312 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 THRSPQ92748 146 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 DPF1Q92782 380 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 HSPB9Q9BQS6 159 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 TMED9Q9BVK6 235 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 CST11Q9H112 138 aa13.56□□□□□ -0.24
SGMS1-204ENST00000492601 PTGES3LE9PB15 166 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 CDK1P06493 297 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 SLC2A2P11168 524 aaPredicted RBP13.55□□□□□ -0.24
SGMS1-204ENST00000492601 MYF6P23409 242 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 SLC6A1P30531 599 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 RAB25P57735 213 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 LSAMPQ13449 338 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 DEFB136Q30KP8 78 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 RBM48Q5RL73 367 aaKnown RBP13.55□□□□□ -0.24
SGMS1-204ENST00000492601 FAM71E2Q8N5Q1 922 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 RAX2Q96IS3 184 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 P2RX4Q99571 388 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 SULT4A1Q9BR01 284 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 ABHD14AQ9BUJ0 271 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 MND1Q9BWT6 205 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 GPR61Q9BZJ8 451 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 KCNK15Q9H427 330 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 MBNL3Q9NUK0 354 aaKnown RBP13.55□□□□□ -0.24
SGMS1-204ENST00000492601 GHRLQ9UBU3 117 aa13.55□□□□□ -0.24
SGMS1-204ENST00000492601 H0YHG0 523 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 LANCL1O43813 399 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 RRP9O43818 475 aaKnown RBP13.54□□□□□ -0.24
SGMS1-204ENST00000492601 VSIG8P0DPA2 414 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 SOX6P35712 828 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 CXorf66Q5JRM2 361 aaPredicted RBP13.54□□□□□ -0.24
SGMS1-204ENST00000492601 STEAP3Q658P3 488 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 UNQ9370/PRO34162Q6UXP9 181 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 LRRTM1Q86UE6 522 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 OR8H1Q8NGG4 311 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 NEDD4LQ96PU5 975 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 FAAP24Q9BTP7 215 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 GON7Q9BXV9 100 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 VCXQ9H320 206 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 DCLRE1BQ9H816 532 aa13.54□□□□□ -0.24
SGMS1-204ENST00000492601 CCL24O00175 119 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 UBBP0CG47 229 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 CHATP28329 748 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 OR3A3P47888 321 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 RPS27AP62979 156 aaKnown RBP13.53□□□□□ -0.24
SGMS1-204ENST00000492601 FOXE3Q13461 319 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 MMDQ15546 238 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 C6orf141Q5SZD1 244 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 GLT8D1Q68CQ7 371 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 C6orf201Q7Z4U5 140 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 CEACAM19Q7Z692 300 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 ODF3L1Q8IXM7 274 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 MS4A15Q8N5U1 240 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 MCRIP2Q9BUT9 160 aaKnown RBP13.53□□□□□ -0.24
SGMS1-204ENST00000492601 TMEM59Q9BXS4 323 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 MRPL20Q9BYC9 149 aaKnown RBP13.53□□□□□ -0.24
SGMS1-204ENST00000492601 JPT1Q9UK76 154 aa13.53□□□□□ -0.24
SGMS1-204ENST00000492601 SORL1Q92673 2214 aa13.52□□□□□ -0.24
SGMS1-204ENST00000492601 VDAC1P21796 283 aa13.52□□□□□ -0.25
SGMS1-204ENST00000492601 CNTFRP26992 372 aa13.52□□□□□ -0.25
SGMS1-204ENST00000492601 SPHARQ15513 63 aa13.52□□□□□ -0.25
SGMS1-204ENST00000492601 MED22Q15528 200 aa13.52□□□□□ -0.25
SGMS1-204ENST00000492601 RNLSQ5VYX0 342 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms