RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 RPS4Y2Q8TD47 263 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 CMBLQ96DG6 245 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 NEIL1Q96FI4 390 aaPredicted RBP10.87□□□□□ -0.67
HDAC3-213ENST00000492506 GALNT14Q96FL9 552 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 C4orf36Q96KX1 117 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 PHB2Q99623 299 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 NUDT16L1Q9BRJ7 211 aaKnown RBP10.87□□□□□ -0.67
HDAC3-213ENST00000492506 NMES1Q9C002 83 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 OR51V1Q9H2C8 321 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 CMC2Q9NRP2 79 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 KLK11Q9UBX7 282 aa10.87□□□□□ -0.67
HDAC3-213ENST00000492506 A0A1B0GW64 132 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 C7orf77A4D0Y5 90 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 RIIAD1A6NNX1 92 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 DVL1O14640 695 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 LY86O95711 162 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 ABHD16AO95870 558 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 CYB5R3P00387 301 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-213ENST00000492506 HCKP08631 526 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 LYL1P12980 280 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 GTF2F2P13984 249 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 SRMP19623 302 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 TUBG1P23258 451 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 GABRR1P24046 479 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 CDK2P24941 298 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 SULT1A2P50226 295 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 OR2B8PP59922 312 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 TAF13Q15543 124 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 C2orf68Q2NKX9 166 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 BEAN1Q3B7T3 259 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 MOGAT2Q3SYC2 334 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 GPR157Q5UAW9 335 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 STEAP1BQ6NZ63 245 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 ZNF841Q6ZN19 808 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 Q6ZPA2 131 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 NPEPL1Q8NDH3 523 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 LFNGQ8NES3 379 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 PFN4Q8NHR9 129 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 LIPHQ8WWY8 451 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 DYRK2Q92630 601 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 RRNAD1Q96FB5 475 aaKnown RBP10.86□□□□□ -0.67
HDAC3-213ENST00000492506 FAM71F1Q96KD3 344 aaPredicted RBP10.86□□□□□ -0.67
HDAC3-213ENST00000492506 PBDC1Q9BVG4 233 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 WDR13Q9H1Z4 485 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 TXNIPQ9H3M7 391 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 SIRT7Q9NRC8 400 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 TUBG2Q9NRH3 451 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 C20orf141Q9NUB4 165 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 SLC2A8Q9NY64 477 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 STARD10Q9Y365 291 aa10.86□□□□□ -0.67
HDAC3-213ENST00000492506 NOP16Q9Y3C1 178 aaKnown RBP10.86□□□□□ -0.67
HDAC3-213ENST00000492506 A0A087WWC5 75 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 A0A0B4J2A0 478 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 A0A1W2PPE3 182 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 A6NLC8 198 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 TRDCB7Z8K6 153 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 C22orf46C9J442 243 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 H0YL77 283 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 J3QLW9 94 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 IFNL4K9M1U5 179 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 GPR137BO60478 399 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 SFTPBP07988 381 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 FCGR3AP08637 254 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 ZNF19P17023 458 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 PSMB6P28072 239 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 PRSS3P35030 304 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 USF2Q15853 346 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-213ENST00000492506 FAM201AQ5SY85 155 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 KPRPQ5T749 579 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-213ENST00000492506 FAM27D1Q5T7N8 215 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 WDR25Q64LD2 544 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-213ENST00000492506 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 LYPD2Q6UXB3 125 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 LYG2Q86SG7 212 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 SYT9Q86SS6 491 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 TGIF2LXQ8IUE1 241 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 FAM110DQ8TAY7 271 aaPredicted RBP10.85□□□□□ -0.67
HDAC3-213ENST00000492506 PPP1R1CQ8WVI7 109 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 SSMEM1Q8WWF3 244 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 ASB17Q8WXJ9 295 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 PRRT1Q99946 306 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 ALG12Q9BV10 488 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 SHPKQ9UHJ6 478 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 AK6Q9Y3D8 172 aaKnown RBP10.85□□□□□ -0.67
HDAC3-213ENST00000492506 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
HDAC3-213ENST00000492506 CENPVL3A0A0U1RRI6 287 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 G3V4G9 280 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 GAPDHP04406 335 aaKnown RBP10.84□□□□□ -0.67
HDAC3-213ENST00000492506 MMP9P14780 707 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 PYCR1P32322 319 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 CFHR2P36980 270 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 PCBD1P61457 104 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 ZNF85Q03923 595 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 TNFRSF9Q07011 255 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 RBM39Q14498 530 aaKnown RBP10.84□□□□□ -0.67
HDAC3-213ENST00000492506 HEPN1Q6WQI6 88 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 ZSCAN4Q8NAM6 433 aaPredicted RBP10.84□□□□□ -0.67
HDAC3-213ENST00000492506 OR10AD1Q8NGE0 317 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 OR8B3Q8NGG8 313 aa10.84□□□□□ -0.67
HDAC3-213ENST00000492506 LYPD6BQ8NI32 183 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms