RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 ZNF581Q9P0T4 197 aa10.6□□□□□ -0.71
ATG4B-222ENST00000491867 AASSQ9UDR5 926 aa10.6□□□□□ -0.71
ATG4B-222ENST00000491867 FADS2O95864 444 aaKnown RBP10.59□□□□□ -0.71
ATG4B-222ENST00000491867 GABRB1P18505 474 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 CD1BP29016 333 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 ALDH3A2P51648 485 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 ZIK1Q3SY52 487 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-222ENST00000491867 ASCL4Q6XD76 172 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 SUMF2Q8NBJ7 301 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 PYDC1Q8WXC3 89 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 RGP1Q92546 391 aaPredicted RBP10.59□□□□□ -0.71
ATG4B-222ENST00000491867 IFT22Q9H7X7 185 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 FAM118AQ9NWS6 357 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 TAS2R4Q9NYW5 299 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 MRPS28Q9Y2Q9 187 aaKnown RBP10.59□□□□□ -0.71
ATG4B-222ENST00000491867 CEPT1Q9Y6K0 416 aa10.59□□□□□ -0.71
ATG4B-222ENST00000491867 CIB2O75838 187 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 ATP5HO75947 161 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 OR7C1O76099 320 aaPredicted RBP10.58□□□□□ -0.72
ATG4B-222ENST00000491867 LGALS1P09382 135 aaKnown RBP10.58□□□□□ -0.72
ATG4B-222ENST00000491867 GZMHP20718 246 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 RBM11P57052 281 aaKnown RBP10.58□□□□□ -0.72
ATG4B-222ENST00000491867 NHLRC3Q5JS37 347 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 LINC00311Q8N616 119 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 C8orf31Q8N9H6 132 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 OR52M1Q8NGK5 317 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 JAM3Q9BX67 310 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 PARP11Q9NR21 331 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 IL36GQ9NZH8 169 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 ST3GAL6Q9Y274 331 aa10.58□□□□□ -0.72
ATG4B-222ENST00000491867 TRAV41A0A0B4J266 112 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 TMEM30CPA0ZSE6 113 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 CXorf65A6NEN9 183 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 C15orf65H3BRN8 121 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 SDCBPO00560 298 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-222ENST00000491867 ATP6V0E1O15342 81 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 DEDDO75618 318 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 CDRT1O95170 752 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 HTR3BO95264 441 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 SOX2P48431 317 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 GBX2P52951 348 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-222ENST00000491867 RAB40BQ12829 278 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 GTSCR1Q86UQ5 136 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 CASTOR1Q8WTX7 329 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 RTN4IP1Q8WWV3 396 aaPredicted RBP10.57□□□□□ -0.72
ATG4B-222ENST00000491867 Q96MT0 163 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 AMBNQ9NP70 447 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 GMPPBQ9Y5P6 360 aa10.57□□□□□ -0.72
ATG4B-222ENST00000491867 H3BNX3 289 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 GEMIN2O14893 280 aaKnown RBP10.56□□□□□ -0.72
ATG4B-222ENST00000491867 IGHV3-11P01762 117 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 HSPB1P04792 205 aaKnown RBP10.56□□□□□ -0.72
ATG4B-222ENST00000491867 CD2P06729 351 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 GTF2A1P52655 376 aaPredicted RBP10.56□□□□□ -0.72
ATG4B-222ENST00000491867 PMS2P11Q13670 270 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 LINC00596Q86U02 117 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 CBR4Q8N4T8 237 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 MINDY2Q8NBR6 621 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 OR52I1Q8NGK6 324 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 OR52N1Q8NH53 320 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 RHOXF1Q8NHV9 184 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 UBALD1Q8TB05 177 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 GPR148Q8TDV2 347 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 ARL11Q969Q4 196 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 TMEM106AQ96A25 262 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 FLYWCH2Q96CP2 140 aaKnown RBP10.56□□□□□ -0.72
ATG4B-222ENST00000491867 METTL9Q9H1A3 318 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 GFOD1Q9NXC2 390 aa10.56□□□□□ -0.72
ATG4B-222ENST00000491867 H0Y980 276 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 ORC5O43913 435 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 CSTBP04080 98 aaKnown RBP10.55□□□□□ -0.72
ATG4B-222ENST00000491867 LIMS3P0CW19 117 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 LIMS4P0CW20 117 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 SNRPBP14678 240 aaKnown RBP10.55□□□□□ -0.72
ATG4B-222ENST00000491867 IL3RAP26951 378 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 ZNF93P35789 620 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-222ENST00000491867 MPV17LQ2QL34 196 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 Q3ZCU0 254 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 DDI2Q5TDH0 399 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 XAF1Q6GPH4 301 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 LINC00322Q6ZN03 302 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-222ENST00000491867 ZNF497Q6ZNH5 498 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 CCDC107Q8WV48 283 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 THAP7Q9BT49 309 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-222ENST00000491867 TMEM138Q9NPI0 162 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 PAK1IP1Q9NWT1 392 aaPredicted RBP10.55□□□□□ -0.72
ATG4B-222ENST00000491867 FAM53CQ9NYF3 392 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 ING4Q9UNL4 249 aa10.55□□□□□ -0.72
ATG4B-222ENST00000491867 IGHV3-43A0A0B4J1X8 118 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 TXNL1O43396 289 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 SOX15O60248 233 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 RGS11O94810 467 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 IGHV3-43DP0DP04 118 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 SERPINA2P20848 420 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 BLVRBP30043 206 aaPredicted RBP10.54□□□□□ -0.72
ATG4B-222ENST00000491867 ZNF137PP52743 207 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 PPP3R1P63098 170 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 MMDQ15546 238 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 CCDC58Q4VC31 144 aa10.54□□□□□ -0.72
ATG4B-222ENST00000491867 ATAD3CQ5T2N8 411 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms