RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 TRDCB7Z8K6 153 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 LANCL1O43813 399 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 GDNFP39905 211 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 ARPC4P59998 168 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 OR52W1Q6IF63 320 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 C16orf87Q6PH81 154 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 MOB1BQ7L9L4 216 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 VMO1Q7Z5L0 202 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 GAPTQ8N292 157 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 OR13A1Q8NGR1 328 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 ARL11Q969Q4 196 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 SDHCQ99643 169 aaPredicted RBP11.16□□□□□ -0.62
CDK9-204ENST00000491521 CCDC32Q9BV29 185 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 NCOR1P1Q9H4R4 102 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 UNKLQ9H9P5 680 aaKnown RBP11.16□□□□□ -0.62
CDK9-204ENST00000491521 TAS2R8Q9NYW2 309 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 MGAT4AQ9UM21 535 aa11.16□□□□□ -0.62
CDK9-204ENST00000491521 TRRAPQ9Y4A5 3859 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 TRBV23-1A0A0A0MS06 115 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 TRBV6-6A0A0A6YYG2 114 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 IGHV1-69DA0A0B4J2H0 117 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 A0A1W2PPH5 198 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 CLDN34H7C241 214 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 SPINT2O43291 252 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 IGHV1-69P01742 117 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 CSF1P09603 554 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 IL7P13232 177 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 MDKP21741 143 aaPredicted RBP11.15□□□□□ -0.62
CDK9-204ENST00000491521 HLA-DMAP28067 261 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 KIR2DS4P43632 304 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 OR3A3P47888 321 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 DLX1P56177 255 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 PAX5Q02548 391 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 SSBP1Q04837 148 aaKnown RBP11.15□□□□□ -0.62
CDK9-204ENST00000491521 KIR2DS1Q14954 304 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 ZNF880Q6PDB4 577 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 TRAT1Q6PIZ9 186 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 C5orf24Q7Z6I8 188 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 TOMM5Q8N4H5 51 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 RFESDQ8TAC1 157 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 UBALD1Q8TB05 177 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 BORCS5Q969J3 196 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 ZNF747Q9BV97 191 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 TAF9BQ9HBM6 251 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 SIRT7Q9NRC8 400 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 UBE2J1Q9Y385 318 aaPredicted RBP11.15□□□□□ -0.62
CDK9-204ENST00000491521 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
CDK9-204ENST00000491521 A0A0U1RQK1 487 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 ZNF736B4DX44 427 aaPredicted RBP11.14□□□□□ -0.63
CDK9-204ENST00000491521 FABP7O15540 132 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 PMP2P02689 132 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 CRYBA1P05813 215 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 SCTP09683 121 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 GSTT2P0CG29 244 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 TAS2R19P59542 299 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 AP3S2P59780 193 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 HLA-DRB3P79483 266 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 SRSF7Q16629 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
CDK9-204ENST00000491521 LTC4SQ16873 150 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 OR5H2Q8NGV7 314 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 SGMS2Q8NHU3 365 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 IL1F10Q8WWZ1 152 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 CORO2AQ92828 525 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 ZNF714Q96N38 554 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 GAL3ST2Q9H3Q3 398 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 RAB9BQ9NP90 201 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 MBNL3Q9NUK0 354 aaKnown RBP11.14□□□□□ -0.63
CDK9-204ENST00000491521 ANXA10Q9UJ72 324 aa11.14□□□□□ -0.63
CDK9-204ENST00000491521 RBMX2Q9Y388 322 aaKnown RBP11.14□□□□□ -0.63
CDK9-204ENST00000491521 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 ANKRD20A5PA0PJZ0 165 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 ZNF729A6NN14 1252 aaPredicted RBP11.13□□□□□ -0.63
CDK9-204ENST00000491521 C12orf77C9JDV5 145 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 UPK1BO75841 260 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 HBZP02008 142 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 CD3DP04234 171 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 IFNA6P05013 189 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 ZNF728P0DKX0 622 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 CCL3L1P16619 93 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 NAT1P18440 290 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 TAS2R46P59540 309 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 BPIFB3P59826 476 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 KLRD1Q13241 179 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 ZNF273Q14593 569 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 STEAP1BQ6NZ63 245 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 SHISA2Q6UWI4 295 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 Q6YL49 198 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 Q6ZPA2 131 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 LYSMD2Q8IV50 215 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 OR5AP2Q8NGF4 316 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 OR4A4PQ8NGN8 299 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 OR1L1Q8NH94 360 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 SNAPC3Q92966 411 aa11.13□□□□□ -0.63
CDK9-204ENST00000491521 GALMQ96C23 342 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms