RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 RPLP1P05386 114 aaKnown RBP6.53□□□□□ -1.36
LSM2-213ENST00000491421 CDK1P06493 297 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 UBBP0CG47 229 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 RCC1P18754 421 aaPredicted RBP6.53□□□□□ -1.36
LSM2-213ENST00000491421 CD1BP29016 333 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 RPL23AP62750 156 aaKnown RBP6.53□□□□□ -1.36
LSM2-213ENST00000491421 ACSM3Q53FZ2 586 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 CT45A1Q5HYN5 189 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 NKAPLQ5M9Q1 402 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 RBM48Q5RL73 367 aaKnown RBP6.53□□□□□ -1.36
LSM2-213ENST00000491421 C6orf141Q5SZD1 244 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 FAM27D1Q5T7N8 215 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 RNLSQ5VYX0 342 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 GLT8D1Q68CQ7 371 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 SIGIRRQ6IA17 410 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 C16orf54Q6UWD8 224 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 SLC25A48Q6ZT89 311 aaKnown RBP6.53□□□□□ -1.36
LSM2-213ENST00000491421 TGIF2LXQ8IUE1 241 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 MS4A15Q8N5U1 240 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 COMMD1Q8N668 190 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 Q8N6K4 173 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 ZNF439Q8NDP4 499 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 OR51D1Q8NGF3 324 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 CT45A3Q8NHU0 189 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 ST6GALNAC6Q969X2 333 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 RCC1LQ96I51 464 aaKnown RBP6.53□□□□□ -1.36
LSM2-213ENST00000491421 TMED9Q9BVK6 235 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 KRTAP3-3Q9BYR6 98 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 KRTAP3-2Q9BYR7 98 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 DCLRE1BQ9H816 532 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 TAF9BQ9HBM6 251 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 OR2S2Q9NQN1 319 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 LIN7CQ9NUP9 197 aaKnown RBP6.53□□□□□ -1.36
LSM2-213ENST00000491421 SCN3BQ9NY72 215 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 KCNIP1Q9NZI2 227 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 LINC00527Q9UJ94 153 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 KIAA2026Q5HYC2 2103 aa6.53□□□□□ -1.36
LSM2-213ENST00000491421 NUDT19A8MXV4 375 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 ZNF736B4DX44 427 aaPredicted RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 H0YHG0 523 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 J3KRW8 73 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 AP4M1O00189 453 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 DUS4LO95620 317 aaKnown RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 GPR12P47775 334 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 ZNF134P52741 427 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 ZNF137PP52743 207 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 GP2P55259 537 aaKnown RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 RPS27AP62979 156 aaKnown RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 SPHARQ15513 63 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 MED22Q15528 200 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 HSD17B12Q53GQ0 312 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 STEAP3Q658P3 488 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 UNQ9370/PRO34162Q6UXP9 181 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 OR2W3Q7Z3T1 314 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 CEACAM19Q7Z692 300 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 ZNF554Q86TJ5 538 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 LRRTM1Q86UE6 522 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 STPG2Q8N412 459 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 LINC00482Q8N8I6 264 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 Q8N9W7 124 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 OR8H1Q8NGG4 311 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 OR52L2PQ8NGH6 319 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 MRPL30Q8TCC3 161 aaKnown RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 PHYHIPQ92561 330 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 CYYR1Q96J86 154 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 NEDD4LQ96PU5 975 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 RASL11BQ9BPW5 248 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 TMEM59Q9BXS4 323 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 ABCG5Q9H222 651 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 NKX1-2Q9UD57 310 aaPredicted RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 JPT1Q9UK76 154 aa6.52□□□□□ -1.37
LSM2-213ENST00000491421 LSM2Q9Y333 95 aaKnown RBP6.52□□□□□ -1.37
LSM2-213ENST00000491421 LINC01548A6NM66 108 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 LANCL1O43813 399 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 RRP9O43818 475 aaKnown RBP6.51□□□□□ -1.37
LSM2-213ENST00000491421 VSIG8P0DPA2 414 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 SRMP19623 302 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 CHATP28329 748 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 HTR2CP28335 458 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 SLC6A1P30531 599 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 PPP1CCP36873 323 aaKnown RBP6.51□□□□□ -1.37
LSM2-213ENST00000491421 AQP4P55087 323 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 HTD2P86397 168 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 LSAMPQ13449 338 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 GNMTQ14749 295 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 MORN2Q502X0 79 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 C1orf100Q5SVJ3 147 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 LIPKQ5VXJ0 399 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 OR10K2Q6IF99 312 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 TEX38Q6PEX7 206 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 ETV3LQ6ZN32 361 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 C18orf65Q6ZTR6 163 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 C8orf86Q6ZUL3 223 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 MRPL41Q8IXM3 137 aaKnown RBP6.51□□□□□ -1.37
LSM2-213ENST00000491421 KLHL30-AS1Q8NEE0 82 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 KCNG3Q8TAE7 436 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 UFD1Q92890 307 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 TMEM203Q969S6 136 aa6.51□□□□□ -1.37
LSM2-213ENST00000491421 GALMQ96C23 342 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms